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SCNpilot_expt_1000_bf_scaffold_4996_7

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 3808..4851

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YAE4_DICT6 similarity UNIREF
DB: UNIREF100
  • Identity: 35.0
  • Coverage: 337.0
  • Bit_score: 221
  • Evalue 1.60e-54
Uncharacterized protein {ECO:0000313|EMBL:EWY41826.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 341.0
  • Bit_score: 459
  • Evalue 4.90e-126
transcriptional regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 337.0
  • Bit_score: 221
  • Evalue 5.00e-55

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Taxonomy

Skermanella stibiiresistens → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGGTAGAGCGAAAGAAAGTCACCATCAAGGACGTGGCCAAGGCCTCCGGGCTTGCCCTGTCGACGGTATCGAATGCCCTGTCCGGCAAGCAGTATGTCCGAGACGAGACGCGCGAGCTCGTCAACGAGACGGCGCGAAAGCTCGGCTATCGCGCTTCGACCGTCGCGCGCGCCCTGCGCATGCAGAGAAGCTTCACCATCGGGGTGCTGATTTCCGATGTCGCAAACCCCTCCTCGGCCGATTTCGTCCGCGGTGTAGAGGATGTGGTGATGCGCGAAAAATGCACCATGCTGCTCTGCAACACCGACGAGGACGAGGAGCGGCAGATCCTGCACATGCAGACGCTGCACGACCGCCAGGTGGATGGAATGGTGCTGATTTCGCAGCATTGCGATTCGCCGCGCGTGCGGGCGCTGCTCGATGCCGGCACGCCCTATGTTCTGGTTCAGCGCAGAAGCCCGAAATGGAAAGACGACTATGTCGGCTCCGACAATGAGGAAGGGCTGGCCGAGGCCATCCGGCATGCCCATGCACTCGGCCACCGCCGCGTCGGCTTTGTGACGGGGCCTCTCGAATCGAGTTCGGCGCGCGAGCGGCTCGAGACCTTCCGGCAGGAAAGCCTCAGGCTGCGGCTGTCGCAGTCGCGGTCCATGATCTTCCAGGGCCGGTACACGTTCGACAGCGGCCTTGAGGCCGGCCGATATTTCACCGAGCTGAAGAATCGTCCGACCTGCATCCTGGCAAGTAGCGACATGAACGCGCTCGGGGTGATGCAGGTTGCGCTCGACCAGGGCTTGCGCATCCCCGGCGATCTTTCCGTCATCGGCCTCGACGATATCGTTCTCGCCAATCTCAAGACGATCAACCTGACGACCATCCAGTTGCAGAAGCGCGACATGGGGGCGGCGGCAGCGGAACTTTTGATGAAGCGGATCAGGCAGCCGTCCAAGACCGGCAAGCAGATCATTCTGCCGACCCGTCTGATCGTGCGGGGAACAACCGCGCCGCCGGCCGCCGCCGACATGTCCACCTATACGGACTGA
PROTEIN sequence
Length: 348
MVERKKVTIKDVAKASGLALSTVSNALSGKQYVRDETRELVNETARKLGYRASTVARALRMQRSFTIGVLISDVANPSSADFVRGVEDVVMREKCTMLLCNTDEDEERQILHMQTLHDRQVDGMVLISQHCDSPRVRALLDAGTPYVLVQRRSPKWKDDYVGSDNEEGLAEAIRHAHALGHRRVGFVTGPLESSSARERLETFRQESLRLRLSQSRSMIFQGRYTFDSGLEAGRYFTELKNRPTCILASSDMNALGVMQVALDQGLRIPGDLSVIGLDDIVLANLKTINLTTIQLQKRDMGAAAAELLMKRIRQPSKTGKQIILPTRLIVRGTTAPPAAADMSTYTD*