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SCNpilot_expt_1000_bf_scaffold_6020_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 3157..3750

Top 3 Functional Annotations

Value Algorithm Source
Electron transport protein SCO1/SenC n=1 Tax=Roseovarius sp. TM1035 RepID=A6E4W7_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 165.0
  • Bit_score: 127
  • Evalue 1.80e-26
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:EDM30261.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM1035.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 165.0
  • Bit_score: 127
  • Evalue 2.50e-26
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 191.0
  • Bit_score: 104
  • Evalue 3.00e-20

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Taxonomy

Roseovarius sp. TM1035 → Roseovarius → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGAACAGGATCGTCTCCGTCGCCCTTCCCCTTGCGGTGTTCCTCGGCCTAGCGGCATCGGCGGCGATCGTCGCCGGCCGCGTCCTGCCTGCGCGGCAGGCCGCCACGATGGCGCAGGAGCCGGTGGACCTTCCCGACGTGCGCCTGACCGACCAGCACGGACACGACGCGGCGCTGGTCAGCGAGCTTGCCGGCGACGATCTCCTCGTGGTGACGTTCAACTATACGTCCTGCCAGTCCATCTGCGGGGTCGGCAACGCGATCATGCAGGAGCTGGACAGGACCGTCGCGCCGCAGGTGGAGCGGCCCGTCCGTCTCGTGTCCATAACGATAAACCCGACGGTCGACACGCCGGATATCCTGGCCGGCGCGGCGCGCGAATGGGCGCCGAGCGAGCGCTGGCTCTGGACGACCGGGCGGCCGGGCGACATCGACAAGGTGCTGCGGCAGGCCAACGCGCGAACGGCCGACATCGAGCTGCACGAGCTCGTCTTCATCGTCGGGGACGGAAGGCGGAAGGAGTTCCGCCGCATGCCGGTCAACGACGGGACCGTTTCCGGCATCATCGCGGCGCTCGACGGATACGGCCGTTGA
PROTEIN sequence
Length: 198
MNRIVSVALPLAVFLGLAASAAIVAGRVLPARQAATMAQEPVDLPDVRLTDQHGHDAALVSELAGDDLLVVTFNYTSCQSICGVGNAIMQELDRTVAPQVERPVRLVSITINPTVDTPDILAGAAREWAPSERWLWTTGRPGDIDKVLRQANARTADIELHELVFIVGDGRRKEFRRMPVNDGTVSGIIAALDGYGR*