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SCNpilot_expt_1000_bf_scaffold_6023_7

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(4909..5505)

Top 3 Functional Annotations

Value Algorithm Source
GDP-mannose pyrophosphatase NudK {ECO:0000313|EMBL:EYR80683.1}; EC=3.6.1.- {ECO:0000313|EMBL:EYR80683.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 198.0
  • Bit_score: 321
  • Evalue 1.20e-84
GDP-mannose pyrophosphatase NudK n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D6G4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 198.0
  • Bit_score: 321
  • Evalue 8.40e-85
  • rbh
conserved hypothetical protein; putative pyrophosphatase similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 193.0
  • Bit_score: 231
  • Evalue 2.80e-58

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGTCCGCAGAAAAGCAGTCGTCCGTTCGTATCGTCGAGCAGCAGACGGTCTGGAAGCGCTTCATCCATTTGCGCACCCTCGTCCTCGAACAGACCCGTGCCGACGGCCGGGTCGAGTTCCTCGACCGCGAGGTGCACGACCACGGTGCCGCGGCGGCGATCCTCCTCGTCGATCCGGTGCGCCAGACGGTCGTTCTGGTGCGCCAGTTCCGCCCCGGCGCCTTCCTCGGCGGCCACCCGGACGGCTTCCTCCTCGAAGTGCCCGCCGGCCTCCTCGACGACGACAGCCCGGAGGATGCCATCAGCCGCGAGGCGATGGAGGAGACCGGCTATGCCGTCAGCGACCTCCGCCACGTCTTCGACATGTATTCCAGCCCCGGCACGCTGACGGAACGCGTCTCATGCTTTGCCGCCCACATCGATTCCGCCAGGCGCGACGGCAAGGGCGGCGGCGTGGACGGCGAGGGCGAGGATATCGAGATCGTCGAAATGCCGATCGACGAGGCCTGCGGCCTGATCGCCAACGGCGGCATCGTCGATTCAAAGACGATCATGATGCTGCAATGGCTGATGCTGAATCGCGAGGCGTTTGCCTGA
PROTEIN sequence
Length: 199
MSAEKQSSVRIVEQQTVWKRFIHLRTLVLEQTRADGRVEFLDREVHDHGAAAAILLVDPVRQTVVLVRQFRPGAFLGGHPDGFLLEVPAGLLDDDSPEDAISREAMEETGYAVSDLRHVFDMYSSPGTLTERVSCFAAHIDSARRDGKGGGVDGEGEDIEIVEMPIDEACGLIANGGIVDSKTIMMLQWLMLNREAFA*