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SCNpilot_expt_1000_bf_scaffold_6023_10

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 11008..11772

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Rhizobium meliloti RepID=UPI0003721043 similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 254.0
  • Bit_score: 367
  • Evalue 1.30e-98
  • rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EYR78778.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 254.0
  • Bit_score: 429
  • Evalue 3.00e-117
short chain dehydrogenase/reductase family oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 254.0
  • Bit_score: 366
  • Evalue 5.40e-99
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
TTGAAGAATCCCTTGAAGACGGCCCTGGTGACGGGCGGCGCGAAGCGTATCGGCAAGGCCATCGTGGAGGATCTCGCGGCAAACGGCTTTGCGGTCGCCATCCACGCGAACGAATCCCTGGAGGAGGCGGCGGCGATCGCCCGCCGCCTCGGCGAACGTGGCCTCAGGGCCGTCGCGCTGCAATGCGACCTGTCGGACGGGGGCGCGACGGCCCTCCTGATGGACAAGGCGACGGCCGCCATCGGGCCGATCGACCTCCTCGTCAACAATGCCTCGCTGTTCAAGCCCGACAGCGTCACGGCCTTCAACGACACGCTCTGGGAGCGGCACTTCGCCGTGCATCTGAAGGCGCCGTCGATCCTTGCCCGCGACTTCGTGCGCCAGCTTCCCGCGGACGCGGCAGGCTCGATCGTCAACATCATCGACCAGCGCGTCTGGAACCCGACGCCGCGCTATTATTCCTACACGCTCTCCAAGGCGGCCCTGTGGATGGCGACACGGACCATGGCGCAGAGCTTTGCGCCGCGCGTGCGCGTCAATGCCATCGGCCCCGGCCCTTCCCTGCCGAACGAGCGGCAGGACGACGCGGCATTCCAGGCGCAGGTGGAAGGCCTGATCCTGCAGCGCGGCCCCGCCCTGGAGGAATTTGGCCGCACAGTTCGCTTTTTGTTCGACACGCCGTCCATAACGGGGCAAATGATAGCGCTCGACGGCGGACAGCATCTCGCCTGGGAAACACCCGATGTCGGGGGAATAGCGGAATGA
PROTEIN sequence
Length: 255
LKNPLKTALVTGGAKRIGKAIVEDLAANGFAVAIHANESLEEAAAIARRLGERGLRAVALQCDLSDGGATALLMDKATAAIGPIDLLVNNASLFKPDSVTAFNDTLWERHFAVHLKAPSILARDFVRQLPADAAGSIVNIIDQRVWNPTPRYYSYTLSKAALWMATRTMAQSFAPRVRVNAIGPGPSLPNERQDDAAFQAQVEGLILQRGPALEEFGRTVRFLFDTPSITGQMIALDGGQHLAWETPDVGGIAE*