ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5613_8

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(8608..9225)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1P0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 205.0
  • Bit_score: 352
  • Evalue 2.10e-94
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR80839.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 205.0
  • Bit_score: 352
  • Evalue 2.90e-94
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 192.0
  • Bit_score: 291
  • Evalue 1.80e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGAACGGGGCCGAGACATCAAGGAAGGCGAACGGGACATGGGTATTTCAAATCTGGTCACGAAGGCATTCGCGGTCGTTGCGGCGGCTTGCATGACCTTCCTGCTTGCCTTGCCGGCCGCCGCGCAGCAAAGCAGCCAATATTCCATGCAGGAGATCGTCGACGCCGGCCACGGCTTCTTCGGCGAAACGTCCGGCGGCCTTGCCAAGCTGGTCGAGCGCGCCTTCGAATCCTACGGCCTGCCGAACGGCTACATCCTCGGCCAGGAGGGCTCGGGCGCCTTCGTCGCCGGCCTGACCTACGGCGAAGGCACGCTCAACACCAAGAATGCCGGCCAGCACTCGGTCTTCTGGCAGGGCCCCTCCCTCGGCCTCGACTGGGGCGGCCAGGGCAGCCGCACCATGATGCTCGTCTACAATCTGCCCGACGTCAATGCGCTCTTCACCCGTTTCGGCGGCGTCTCCGGCTCGGTCTACGTGATCGCCGGCCTCGGCATGCAGGTCAATGTCAACAACGACATCGTGCTCGTGCCGATCCGCACCGGCGTCGGCGCCCGCATCGGCATCAGCGCCGGCTACCTCAAGCTGACGCGCCAGCCGACCTGGAATCCCTTCTGA
PROTEIN sequence
Length: 206
MERGRDIKEGERDMGISNLVTKAFAVVAAACMTFLLALPAAAQQSSQYSMQEIVDAGHGFFGETSGGLAKLVERAFESYGLPNGYILGQEGSGAFVAGLTYGEGTLNTKNAGQHSVFWQGPSLGLDWGGQGSRTMMLVYNLPDVNALFTRFGGVSGSVYVIAGLGMQVNVNNDIVLVPIRTGVGARIGISAGYLKLTRQPTWNPF*