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SCNpilot_expt_1000_bf_scaffold_5681_7

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 5736..6266

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSW8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 173.0
  • Bit_score: 315
  • Evalue 4.10e-83
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR83747.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 173.0
  • Bit_score: 315
  • Evalue 5.80e-83
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 174.0
  • Bit_score: 278
  • Evalue 1.80e-72

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGACGATCGTTTCGCTGCACAACGACAATCCGCTGCTCGACGGCCGCCAGTCGGATCGCGCCATGATGGTGCGCCGCGGCGTGCAGCGCATGCTGATGGAGATGCGCCACGCCGTGCTGCCGGAACTGACGCTGGCGAGCGGCCGGCGGGCCGACCTCATCAGCCTGTCCGACAGGGGCGAGATCTGGATCGTCGAGATCAAGACGTCGATCGAGGATTTTCGCGTCGATCGCAAGTGGCCCGATTATCGCCGCCATTGCGACCGGCTGTTCTTCGCCACGCACAAGGACGTGCCGCTCGACATCTTCCCCGAGGAATGCGGCCTCATCCTTTCCGACGGCTATGGCGCGCACATGCTGCGCGAGGCGCCGGAGCACAGGCTCCCAGCGCCGACGCGAAAGGCCGTGACCTTCGCCTTCGCCCGCGTCGCCGCGGGCCGCCTGCTTCTTGCGGAGTTCTCGATGGATGCCCGGCGCGACGGGCCGGACATATCCGCCATCGTCTCGGGCCGGCGGGACGAGCCGGCCTGA
PROTEIN sequence
Length: 177
MTIVSLHNDNPLLDGRQSDRAMMVRRGVQRMLMEMRHAVLPELTLASGRRADLISLSDRGEIWIVEIKTSIEDFRVDRKWPDYRRHCDRLFFATHKDVPLDIFPEECGLILSDGYGAHMLREAPEHRLPAPTRKAVTFAFARVAAGRLLLAEFSMDARRDGPDISAIVSGRRDEPA*