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SCNpilot_expt_1000_bf_scaffold_7065_5

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(4212..4901)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEFE8B related cluster n=1 Tax=unknown RepID=UPI0003CEFE8B similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 229.0
  • Bit_score: 302
  • Evalue 3.60e-79
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY62368.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 229.0
  • Bit_score: 302
  • Evalue 5.00e-79
bacteriorhodopsin similarity KEGG
DB: KEGG
  • Identity: 28.8
  • Coverage: 226.0
  • Bit_score: 119
  • Evalue 1.40e-24

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Taxonomy

Mesorhizobium sp. LNHC232B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGTTCGGAGCACTCTTCACATCGCAGGATGTCGTCAGCTCGGCCTATGCAGGCGTGCTCGTCGCGACATTCTCCACGGCCATCCTGTGCTTCCTGGGGCTTTCCTGGGTCAATGAAAAATGGCGCGCGCCCGTCGCCATGGTCGGTGTCGCGGCCCTTGCCTCCTCGCTGCATTACGTCGGTGCCGCCTCGCTCTGGCTTTCGCTACAGAAGGCATCGGGCGGCGTCCGCTTCTCGGGCTGGTTCACGGTCCACCCGCTGCAGGTCGCGGCGGTCTATTTCTATGTGACGACCCTCGGCAAGGTGCCGGTCGGCGTCTTCTGGCGCATGTCGGCCGCCGCCCTGCTGATGGTCTTTTCGCGCTATCTGGGCGATGCCGGCTTCTTCAATCCCACCTTCGGCGTGCTGCTCTCCATCGGCTTCTGGCTCTACATTCTGGGCGAGATGTATTTCGGCGCGATGACCGGCCTCGTGCGCAAGGCAAGCCGCCCCGTACGCTTCGGCTATTTCTGGATACGCCTGATCTTCACCATCGGCTGGGCCATCTATCCCATCCTGCATTTCCTCGACGTGGTCATCGGGACCGGGCAGGCCTCCGGCGTGATCGCGCTCTACACCCTCTTCGACCTCGTCAATCTCATCACTCCGTCGCTCATCGTCCTGGCCGTCGCCGGCCAGGAGCGCTACTGA
PROTEIN sequence
Length: 230
MFGALFTSQDVVSSAYAGVLVATFSTAILCFLGLSWVNEKWRAPVAMVGVAALASSLHYVGAASLWLSLQKASGGVRFSGWFTVHPLQVAAVYFYVTTLGKVPVGVFWRMSAAALLMVFSRYLGDAGFFNPTFGVLLSIGFWLYILGEMYFGAMTGLVRKASRPVRFGYFWIRLIFTIGWAIYPILHFLDVVIGTGQASGVIALYTLFDLVNLITPSLIVLAVAGQERY*