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SCNpilot_expt_1000_bf_scaffold_7438_7

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(6002..6238)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory protein, luxR family protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QM50_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 83.0
  • Bit_score: 102
  • Evalue 2.40e-19
Bacterial regulatory protein, luxR family protein {ECO:0000313|EMBL:EGF93622.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 83.0
  • Bit_score: 102
  • Evalue 3.40e-19
response regulator protein similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 81.0
  • Bit_score: 83
  • Evalue 3.70e-14

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Taxonomy

Asticcacaulis biprosthecium → Asticcacaulis → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGTTGAGCCATTTCCGGGCACCCGCGCCACCCGCCGACGACGCAGCGGTGCTGACCGGGCGCGAGATCGAAACCCTGACGCTGCTGGCGCGCGGGCTTACCGTGGGTGAGGTGGCCGCGCGGTTGGGACTGAAGCCGCACACCGTCGCCGGCTATGTGAAGGTCATCTACCAGAAACTCAACATCTCGACCCGGGCGGAGGCGACCCGCGAGGCCATCTATCGTCGCCTCGCCTGA
PROTEIN sequence
Length: 79
MLSHFRAPAPPADDAAVLTGREIETLTLLARGLTVGEVAARLGLKPHTVAGYVKVIYQKLNISTRAEATREAIYRRLA*