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SCNpilot_expt_1000_bf_scaffold_7324_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 2..367

Top 3 Functional Annotations

Value Algorithm Source
Threonine-phosphate decarboxylase CobC {ECO:0000313|EMBL:EYR80640.1}; EC=4.1.1.81 {ECO:0000313|EMBL:EYR80640.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 122.0
  • Bit_score: 186
  • Evalue 2.10e-44
Threonine-phosphate decarboxylase CobC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQV4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 122.0
  • Bit_score: 186
  • Evalue 1.50e-44
cobC; probabable threonine-phosphate decarboxylase; K02225 cobalamin biosynthetic protein CobC similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 113.0
  • Bit_score: 141
  • Evalue 2.30e-31

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
GAGGCGGCGGTTCTGGATCGCATCGAGGACGGGCTCGGCCCCTGGGCCGTATCGGGGCCGGCCCTGGCGATCGCCGCGACGCTCATGGCTTCCGACACCGCCGCCATCCGCCGTGCCATCGCCGGACGCAAGGCGGCGCTCGACAAGGCGCTTGCCGGTGCGGGACTTGCCGTCGTCGGCGGCACCGGCCTCTTTTCGCTGGTCGAGCATGCCGAGGCTGCCGCCATCCATGAAGGCCTCTGCCGTCACCATGTGCTGGTGCGGCCTTTCGACTATAATCCCCGCTGGCTGCGGTTCGGCCTCGCGCCGGATGCGGCTGCGGATGGCCGGCTTGCCGCGGCGCTGGCGGATGTGATGGGCCGATGA
PROTEIN sequence
Length: 122
EAAVLDRIEDGLGPWAVSGPALAIAATLMASDTAAIRRAIAGRKAALDKALAGAGLAVVGGTGLFSLVEHAEAAAIHEGLCRHHVLVRPFDYNPRWLRFGLAPDAAADGRLAAALADVMGR*