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SCNpilot_expt_1000_bf_scaffold_7324_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 364..1344

Top 3 Functional Annotations

Value Algorithm Source
cobalamin biosynthesis protein CbiB; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 325.0
  • Bit_score: 421
  • Evalue 3.10e-115
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036F8B00 similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 325.0
  • Bit_score: 453
  • Evalue 1.40e-124
  • rbh
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 326.0
  • Bit_score: 537
  • Evalue 1.30e-149

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGACGCAGACGCTTTCGATCCTGTTCCTTGCACTGGTGCTGGACCGCCTTGTCGGCGATCCGGACTGGCTCTGGCGGCGCTTGGCCCATCCGGTCGTGCTGTTCGGCCGGGCGATCGGCGCGATGGACAGGCTGTTCAACGGCAAGCGCCTTTCCGCCCAGACCCGCCGCTTCAACGGCGCGGCCGGCATCGCCGTGCTGCTCGCCGCCAGCGTTTTCCTCGGTTTCGTCCTGCACCGGCTTCTTGCGCCGCTCGGCCTGGCGGGCGCGGCGGTCGAGGTCGTCGTCGTCGCCGTCTTCCTCGCGCAGAAGAGCCTCCACGATCATGTGCGCGCCGTCTCGGCCGGTCTCAAGGAGGGCGGCCTCGAGGGCGGGCGGCAGGCCGTGTCGATGATCGTCGGGCGCGATCCGGCAACGCTGGACGAGCCGGCCGTCTGCCGTGCCGGCATCGAGAGCCTTGCCGAGAACTTCTCCGACGGCGTCGTCGCCCCGGCATTCTGGTATGCGCTCTTCGGCCTGCCGGGTCTTTTCGCCTACAAGATGCTGAACACAGCCGACTCGATGATCGGCCACAAGAACGCAAAATATCTCGATTTCGGCTGGGCCTCCGCCCGGCTCGACGACCTCGCCAACTGGCCGGCCGCGCGCCTGTCGATCCTCTTCATCGCCGCCGGCGCATGGCTGGCGAAGGGCAGGGCGGCCGCCCGCGCCGCCATCGGCACGGCACTGCGCGATGCCGGCCTTCACCGTTCGCCCAATTCCGGCTGGCCGGAAGCGGCGATGGCCGGCGCCGTGGGCATCGGCCTTGCCGGCCCCCGCATCTACGGCGGTGCGCGCGTCGACGAACCCATGATGAACGCCGCCGGCCGCACCGTCGCCACGGCCGCCGACATCGACCTGTCGCTGCGCATCTTTTCCGTCGCCTGCGCCGTTCTTGCGGCTGGCGTGTTGCTGGCAATGATTCCCGCCGCCTTGTTTTGA
PROTEIN sequence
Length: 327
MTQTLSILFLALVLDRLVGDPDWLWRRLAHPVVLFGRAIGAMDRLFNGKRLSAQTRRFNGAAGIAVLLAASVFLGFVLHRLLAPLGLAGAAVEVVVVAVFLAQKSLHDHVRAVSAGLKEGGLEGGRQAVSMIVGRDPATLDEPAVCRAGIESLAENFSDGVVAPAFWYALFGLPGLFAYKMLNTADSMIGHKNAKYLDFGWASARLDDLANWPAARLSILFIAAGAWLAKGRAAARAAIGTALRDAGLHRSPNSGWPEAAMAGAVGIGLAGPRIYGGARVDEPMMNAAGRTVATAADIDLSLRIFSVACAVLAAGVLLAMIPAALF*