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SCNpilot_expt_1000_bf_scaffold_7324_4

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(1936..2661)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional activator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPC1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 241.0
  • Bit_score: 458
  • Evalue 3.20e-126
  • rbh
Putative transcriptional activator {ECO:0000313|EMBL:EYR80643.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 241.0
  • Bit_score: 458
  • Evalue 4.40e-126
fnrN; putative transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 241.0
  • Bit_score: 364
  • Evalue 3.30e-98
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGGAAGTTCGCCGCCAGGATGTCCATAATTCCGATATTCCGCTCGTGTGTCGTGCCTGCGAGGCACGCCACGGCGGCGTCTGCGGCGCCCTGACGCCCGAGCAACTGACCGAACTCAACAAGCACTCCTCCCGCCACCGGCTGGACAGCGGCGCTGAGGTGATCGGCCAGGGCGAGACGGTTGTGAACTATTCCAACATCATGCGCGGCGTGGTGAAGCTGACGAAGGTGATGGCGGACGGCCGCCAGCAGATCGTCGGCCTGCAGTTCGCCCCCGATTTCCTCGGCCGCCCCTTCATCGAGGAAAGCGCCATCACCGCGGAAGCGGCGACCGAAAGCGAGGTCTGCAACTTCCCGCGCAACGTGCTCGACCGGCTGGTCAAGAAGACGCCGGAACTGGAGCACAAGCTGCACCGCCAGGCGCTGAAGGAGCTGGACGAGGCGCGCGACTGGATGCTGACCCTCGGCCGCAAGACGGCGCAGGAGAAGGTCGCGAGCTTCCTCTACCTCATCGCCACCCATATCGACCCGGAGAGCATCGACATGTCGTCCTTCGACCTGCCGCTCTCGCGCGCCGACATCGCCGATTTCCTGGGCCTGACCATCGAGACCGTCAGCCGGCAGTTCACCAAGCTGCGCAAGGAAAACGTCATCCGCATCGAGAACAACCGCCACGTCACCGTCACCGACATGGACCGGTTGATGCGCTACGCCGGCAACGACTGA
PROTEIN sequence
Length: 242
MEVRRQDVHNSDIPLVCRACEARHGGVCGALTPEQLTELNKHSSRHRLDSGAEVIGQGETVVNYSNIMRGVVKLTKVMADGRQQIVGLQFAPDFLGRPFIEESAITAEAATESEVCNFPRNVLDRLVKKTPELEHKLHRQALKELDEARDWMLTLGRKTAQEKVASFLYLIATHIDPESIDMSSFDLPLSRADIADFLGLTIETVSRQFTKLRKENVIRIENNRHVTVTDMDRLMRYAGND*