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SCNpilot_expt_1000_bf_scaffold_7324_5

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 2868..4217

Top 3 Functional Annotations

Value Algorithm Source
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 449.0
  • Bit_score: 787
  • Evalue 7.70e-225
hemN; oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 449.0
  • Bit_score: 606
  • Evalue 7.20e-171
  • rbh
Oxygen-independent coproporphyrinogen-III oxidase HemN n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY99_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 449.0
  • Bit_score: 787
  • Evalue 5.50e-225
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
ATGCAGGATGCACTCGTAGAACGCCTTTCTTCGCCGGTTCCCCGCTATACAAGCTATCCGACGGCGCCGCATTTCGACGAAAGTATCGGCCCGGAGGTCTATTCCGAGTGGCTGGGAAGGCTGGGGCCGGCGAATCGCCTGTCGCTCTACGCGCACATTCCCTATTGCGACCGGCTCTGCTGGTTCTGTGCCTGCCACACCAAGCAGACGCTGCGCTACGAGCCGGTCGAAGCCTATCTCAAGGGGCTTCATGCGGAGATTGCGGCCGTCGGCCGGCGCGTTTGCCGGGATGCGCCCGTGACGGCGCTGCATTTCGGCGGCGGTTCGCCGACCATGCTGCGGCCGGACGACATGGTGGCGCTGAAAAGCTGTCTCGAGCAGAATTTCACCTTCTCGCCCGATGCCGAAATCTCGGTGGAGATGGATCCGAACGATCTCGACGATCTCAGGCACGACGCGCTCGCCGCGATCGGCATGACGCGCGCCAGCCTTGGCATCCAGGATTTCGATCCGAAGGTGCAGACGGCGATCAACCGCATCCAGACCTTCGAGCAGACGCGGGGCGTCGTGGAGGCCGCGCGGGCAAGGGGCGTACGCTCGGTGAACTGCGACATTCTCTACGGCCTGCCGTTCCAGACGATGGAGACGCTGGCCGAGACCGTGCGCGCCGTCATCTCGCTCCGCCCGGACCGAATCGCGCTCTTCGGCTATGCCCATGTGCCGTGGATGAAGAAGCATCAGACGATGATCGACGAGGCCGCATTGCCGGGCGTCGTCGCACGTTTTTCCCAGATGGCGATGGCGGCGGAGATGCTTGTTGCCGCCGGCTACGAGGCCATCGGCATCGACCATTTCGCCCTGCCGGCCGACAGTCTCGCCGCCGCCGCGCGGGACGGCACGCTGCGCCGCAATTTCCAGGGCTATACCGACGACCAGGCGGATGCCCTGATCGGCCTCGGCGCGTCCGCCATCGGCCAGTTGCCCGAGGGCTATTTCCAGAACATGCCGGCGACGGGCGAATATCTGCGCCGGGTGGAGGAGGGCGGCGTCGCGGTGGTCCGCGGCTATGCGCTGACGGACGAGGACCGCGCCCGCGCCTTCGTGATCGAGCGCGTGATGTGCGATTTCGGCTTCTCCTTCGCCGATCTTGCCGCCCGCCATCCGGCTTTCGCCGCCGCGATCCGGGCCGAGGCCCGCGGCTTTGCCGCTTCGGACAAGGACGGCCTGTGCCGCATCGAAGGCGAGAGGTTCGATCTGACGGCGACGGGCCGGCCCTTCGCGCGCACGGTGGCCGCGGTCTTCGACGCGCATCTGTCGAGCGGGCGCGGGCGGCATTCCATCGCGGTGTGA
PROTEIN sequence
Length: 450
MQDALVERLSSPVPRYTSYPTAPHFDESIGPEVYSEWLGRLGPANRLSLYAHIPYCDRLCWFCACHTKQTLRYEPVEAYLKGLHAEIAAVGRRVCRDAPVTALHFGGGSPTMLRPDDMVALKSCLEQNFTFSPDAEISVEMDPNDLDDLRHDALAAIGMTRASLGIQDFDPKVQTAINRIQTFEQTRGVVEAARARGVRSVNCDILYGLPFQTMETLAETVRAVISLRPDRIALFGYAHVPWMKKHQTMIDEAALPGVVARFSQMAMAAEMLVAAGYEAIGIDHFALPADSLAAAARDGTLRRNFQGYTDDQADALIGLGASAIGQLPEGYFQNMPATGEYLRRVEEGGVAVVRGYALTDEDRARAFVIERVMCDFGFSFADLAARHPAFAAAIRAEARGFAASDKDGLCRIEGERFDLTATGRPFARTVAAVFDAHLSSGRGRHSIAV*