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SCNpilot_expt_1000_bf_scaffold_7324_9

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 8812..9741

Top 3 Functional Annotations

Value Algorithm Source
Lipid A biosynthesis C28-acyltransferase {ECO:0000313|EMBL:EYR80650.1}; EC=2.3.1.- {ECO:0000313|EMBL:EYR80650.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 309.0
  • Bit_score: 554
  • Evalue 7.60e-155
lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 307.0
  • Bit_score: 516
  • Evalue 5.10e-144
  • rbh
lauroyl acyltransferase n=1 Tax=Rhizobium giardinii RepID=UPI000373C7A9 similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 308.0
  • Bit_score: 524
  • Evalue 1.00e-145
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGCTGATCACCCGCCTCGTCCTGGCGCTGCGCAATTCGAAGGACTGGTTCGTCGCGCAGTTCGCCTTCGGGCTGCTCAGCCTGCTGAAGCTCCTGCCGGCCGATGGCGCGATCAATTTCGCCGACCGGGCGCTGCGCTGGATCGGGCCGAAAACTAGGCGCCACACGCTGACGCTGACGAACCTGCGCAACGCCTATCCGGAAAAATCCGAGGCAGAGATCGAGGCGATCGCGCTCGATGCCTGGGGCAATATGGGCCGGCTGGCCGCCGAATACGTCTTTCTCGACGAACTGTTCGATTTCGATCCGGAAAATCCGGAGCCGGGCCGCATCGAGGTGTCGGGCATCCCGCTCTTCCTGGACCTTCGCGACAATCCGCGGCCCTTCATCGTCTTCACCGCACATACCGGCAATTTCGAGCTCCTGCCGGTTGCCGGCGCGGCGTTCGGGCTGGATGTGACGGTGCTCTTTCGCCCGCCGAACAATCCCTATGTCGCGGAAAAGGTCTTCGAATTCCGCAAGGCGCGCATGGGGAACCTCGTGCCCTCTCACGCCGGCTCCTCCTTCACGCTCGCCCGCAAGCTGGAAGCAGGGAAGCCGGTCGGCGTTTTGGTGGACCAGAAGTTCGGCAGGGGCCTTTATACGAAATTCTTCGGCCGCGACGTGCAGACCAACCCGCTGCTTGCCAAGCTCGTCCGCCAGTTCGACTGCGAGGTCTACCCGGCGCGCTGCATCCGCCTTCCGGGCAACCGCTACCGGCTGGAACTGGAGCCCGCAATGGCGGTTCCCCGCAAGGCGAACGGCGCGGTCGATGTCGATGCGACGGCCCAAATGCTCAACGACACCGTGGAGCGCTGGGTGCGGGAATATCCCGGCCAGTGGCTCTGGTACCACGACCGCTGGAACATCAAGCGCAGCCTTATTACTTGA
PROTEIN sequence
Length: 310
MLITRLVLALRNSKDWFVAQFAFGLLSLLKLLPADGAINFADRALRWIGPKTRRHTLTLTNLRNAYPEKSEAEIEAIALDAWGNMGRLAAEYVFLDELFDFDPENPEPGRIEVSGIPLFLDLRDNPRPFIVFTAHTGNFELLPVAGAAFGLDVTVLFRPPNNPYVAEKVFEFRKARMGNLVPSHAGSSFTLARKLEAGKPVGVLVDQKFGRGLYTKFFGRDVQTNPLLAKLVRQFDCEVYPARCIRLPGNRYRLELEPAMAVPRKANGAVDVDATAQMLNDTVERWVREYPGQWLWYHDRWNIKRSLIT*