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SCNpilot_expt_1000_bf_scaffold_7324_12

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 11822..12979

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c oxidase subunit 1 , bacteroid {ECO:0000313|EMBL:EYR80653.1}; EC=1.9.3.1 {ECO:0000313|EMBL:EYR80653.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 385.0
  • Bit_score: 795
  • Evalue 4.20e-227
fixN1; cbb3-type cytochrome c oxidase subunit I (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 385.0
  • Bit_score: 761
  • Evalue 1.10e-217
Cytochrome c oxidase subunit 1 homolog, bacteroid n=6 Tax=Rhizobium meliloti RepID=FIXN_RHIME similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 385.0
  • Bit_score: 761
  • Evalue 3.60e-217

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
GTGTTCTGGGGCTACCAGCTCTTCATCGTCATGGCCGCCACCGGCTATCTGCTCGGCATCACGCAGGGCAGGGAATATGCCGAGCCGGAATGGTATGTCGACCTGTGGCTGACCGTCGTGTGGGTCGCCTATCTCGTCGCCTTCCTCGGCACGATCATGACCCGCAAGGAGCCGCATATCTACGTGGCGAACTGGTTCTACCTGTCGTTCATCGTGACGATCGCCATGCTCCACATCGTCAACAACCTGGCGATCCCGGTCTCGTTCCTCGGCGCGAAGAGCTATTCGGCCTTCTCGGGCGTGCAGGACGCGCTGACGCAATGGTGGTACGGCCATAACGCCGTGGGCTTCTTCCTGACGGCCGGCTTCCTCGGCATGATGTACTACTTCATCCCGAAGCAGGTGAACCGTCCGGTCTATTCCTACCGCCTGTCGATCATCCACTTCTGGGCCCTGATCTTCATGTATATCTGGGCCGGCCCGCACCACCTGCACTATACGGCTCTGCCCGACTGGGCGCAGACGCTCGGCATGGTCTTCTCGGTCATGCTCTGGATGCCCTCGTGGGGCGGCATGATCAACGGCCTGATGACGCTCTCGGGCGCCTGGGACAAGATCCGCACCGACCCGATCGTGCGCATGATGGTCATGGCCGTCGCCTTCTACGGCATGGCGACCTTCGAAGGCCCGATGATGTCGATCAAGTCGGTCAACTCGCTCAGCCACTACACGGACTGGACCATCGGCCACGTTCATTCGGGCGCGCTCGGCTGGAACGGCCTCATCACCTTCGGCGCGATCTACTTCCTCGTTCCGAAGCTGTGGAACCGCGAGCGGCTCTACTCGATCCGCATGGTCAACTGGCACTTCTGGCTCGCGACCCTCGGCATCGTCGTCTACGCCGCCGTCATGTGGGTCGCCGGTATCCAGCAGGGCCTGATGTGGCGCGAATACGACGAGCAGGGCTTCCTGGTCTACTCGTTCGCAGAAACGATCGCCGCCATGTTCCCCTACTACGTGCTGCGTGCCGCCGGCGGCGGGCTGTTCCTGCTGGGCGCACTCATCATGGCCTACAACGTGACCATGACAATCCTCGGCTACCAGCGTGACGAGGCCCCGATCCCGGGCGCCGCGCCGACCCTGCAGCCGGCCGAATAG
PROTEIN sequence
Length: 386
VFWGYQLFIVMAATGYLLGITQGREYAEPEWYVDLWLTVVWVAYLVAFLGTIMTRKEPHIYVANWFYLSFIVTIAMLHIVNNLAIPVSFLGAKSYSAFSGVQDALTQWWYGHNAVGFFLTAGFLGMMYYFIPKQVNRPVYSYRLSIIHFWALIFMYIWAGPHHLHYTALPDWAQTLGMVFSVMLWMPSWGGMINGLMTLSGAWDKIRTDPIVRMMVMAVAFYGMATFEGPMMSIKSVNSLSHYTDWTIGHVHSGALGWNGLITFGAIYFLVPKLWNRERLYSIRMVNWHFWLATLGIVVYAAVMWVAGIQQGLMWREYDEQGFLVYSFAETIAAMFPYYVLRAAGGGLFLLGALIMAYNVTMTILGYQRDEAPIPGAAPTLQPAE*