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SCNpilot_expt_1000_bf_scaffold_8662_7

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(4300..5382)

Top 3 Functional Annotations

Value Algorithm Source
Ribose transport system permease protein RbsC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHM6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 360.0
  • Bit_score: 681
  • Evalue 4.50e-193
  • rbh
Ribose transport system permease protein RbsC {ECO:0000313|EMBL:EYR84048.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 360.0
  • Bit_score: 681
  • Evalue 6.30e-193
frcC; sugar ABC transporter transmembrane protein; K10553 fructose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 360.0
  • Bit_score: 617
  • Evalue 3.30e-174
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGAGTGAGACAACGACGGCCTCGCAGCCATCGCAGGAATTCGAGAAGGTGCTATCGGGCAGCTCGACGCAGGTCGCATCCTTCGATACCAACGACAAGACGCCCCTCCAGAAGTTCCAGCACTTCCTGCACGGCAGCCCATCGGCCGTGCCGCTGATCGTGCTGGTGCTCTCGGTGGCGGTGTTCGGCGCCGTTCTCGGCGGCAAGTTCTTCTCCGCCTTCACGCTGACGCTCATCCTCCAGCAGGTGGCGATCGTCGGCATCGTCGGCGCGGCGCAGACGCTGGTGATCCTGACCGCGGGCATCGACCTTTCGGTCGGCGCGATCATGGTGCTCTCCTCCGTGGTCATGGGCCAGTTCACCTTCCGCTACGGCCTGCCGCCAGCGGTGGCGGTCGCCTGCGGCCTGGCCTGCGGCGCGCTCTGCGGCTATATCAACGGCCTGCTCGTCGCCCGCATGAAGCTGCCGCCCTTCATCGTCACGCTCGGCATGTGGCAGGTCATCCTCGCCTCGAACTTCCTCTATTCGGCCAACGAGACGATCCGCTCGCAGGACATCGCCACGCAGGCCCCGCTGCTGCAGTTCTTCGGCAACAACCTCAAGCTCGGCAGCGCCGTCTTCACCTATGGCGTCATCGCCATGGTGCTGCTCGTCGCCGTCCTCTGGTACGTGCTGAACCACACCGCCTGGGGCCGCCATGTCTATGCGGTCGGCGACGACCCTGATGCGGCGGAGCTGGCCGGCGTCAACGTCAAGCGCATGCTGGTCTCGGTCTATACGCTGTCCGGCCTCATCTGCGCGCTCGCCGGCTGGGCGCTCATCGGCCGCATCGGCTCGGTCTCGCCGACCGCCGGCCAGTTCGCCAACATCGAATCCATCACGGCGGTGGTGATCGGCGGCCTCTCGCTGTTCGGCGGGCGCGGCTCGATCCTCGGCATGATCTTCGGCGCGCTCATCGTCGGCGTCTTCTCGCTCGGCCTTCGCCTCATCGGCACGGACCCGCAATGGACCTATCTCCTGATCGGCGTCCTCATCATCTCGGCCGTCGCAATCGACCAGTGGATCAGAAAGGTAGCAGGCTGA
PROTEIN sequence
Length: 361
MSETTTASQPSQEFEKVLSGSSTQVASFDTNDKTPLQKFQHFLHGSPSAVPLIVLVLSVAVFGAVLGGKFFSAFTLTLILQQVAIVGIVGAAQTLVILTAGIDLSVGAIMVLSSVVMGQFTFRYGLPPAVAVACGLACGALCGYINGLLVARMKLPPFIVTLGMWQVILASNFLYSANETIRSQDIATQAPLLQFFGNNLKLGSAVFTYGVIAMVLLVAVLWYVLNHTAWGRHVYAVGDDPDAAELAGVNVKRMLVSVYTLSGLICALAGWALIGRIGSVSPTAGQFANIESITAVVIGGLSLFGGRGSILGMIFGALIVGVFSLGLRLIGTDPQWTYLLIGVLIISAVAIDQWIRKVAG*