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SCNpilot_expt_1000_bf_scaffold_8347_4

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(3240..4226)

Top 3 Functional Annotations

Value Algorithm Source
Transport protein, BenE family n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A8V1_RHIFH similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 322.0
  • Bit_score: 516
  • Evalue 1.70e-143
Benzoate transporter {ECO:0000313|EMBL:EYR79009.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 327.0
  • Bit_score: 583
  • Evalue 2.10e-163
transport protein, BenE family; K05782 benzoate membrane transport protein similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 322.0
  • Bit_score: 516
  • Evalue 5.40e-144

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
CCCGTCTCGATCGCCTGGTCGACGCCGGGCGCGGCGCTGCTGGCAAGTTCCGGCGCGGTCGAGGGCGGGTTCTCCACGGCGGTCGGCGGGTTCCTCGTCTGCGCGGTGCTGATCGTCATTGCGGGCCTGTGGAAGCCGCTCGGCCGCATGGTCGCCGCCATTCCCGGAACGCTCGCCAATGCCATGCTGGCCGGCGTGCTGATCGGCCTCTGCTTCGCGCCGGTCAAGGCCATCGCCTTCAACCCGCTGCTCGGCCTGCCGATCGCGCTCGCCTGGGTCGTCGTCGGCAGCATCAACCGGCTCTATGCCGTGCCCGCCGCGCTCGCCGCCTTCGTCGCGGTGCTCGCCTTCGGCATCGATATCCCCGACGGCGCCTTCGCCGGCCTCGCCGATGCGCTGCTGCCGAAACCGGAACTCGTGACGCCGGCCTTCACCGTCGCCGGGCTCGTCGGCATCGCCCTGCCGCTCTTCATCGTCACCATGGCCTCGCAGAACATTCCCGGCATCGCCGTGCTGAAGGTCAACGACTACGCGCCCAATCCCGGCCCGCTCTTTGCCGTCACCGGCTTCTTCTCGCTGCTTTCGGCCCCCTTCGGCGGCCATGCGGTCAACCTCGCCGCCATCACCGCCGCCATGTGCGCCGGCCCGGACGCCCATCCCGATCCGGCGAAACGCTACTGGGCGGCCATCAATGCCGGCATCTTCTACGTGATCTTCGGCCTTGCCGCGGGCGCGGTTACCGCCTTCGTCGCCCTCGCCCCGCCGATCCTCATCCAGGCGGTCGCAGGCCTTGCGCTGATCAGCGCCTTCGCCGCCTCCGCGCTCAATGCCTTCCGCGAGACGGAGGGGCGGGAAGCGGCGGCGGTGACCTTCCTCGTCACCGCCTCGGGCGTTTCCTTCGCCGGCATTTCCGGCGCCTTCTGGGGCCTCATCGCCGGCGGCCTGATGCTGGCGCTCTCCCGTTTCGTGGCGAGCCTTCGCAAATAA
PROTEIN sequence
Length: 329
PVSIAWSTPGAALLASSGAVEGGFSTAVGGFLVCAVLIVIAGLWKPLGRMVAAIPGTLANAMLAGVLIGLCFAPVKAIAFNPLLGLPIALAWVVVGSINRLYAVPAALAAFVAVLAFGIDIPDGAFAGLADALLPKPELVTPAFTVAGLVGIALPLFIVTMASQNIPGIAVLKVNDYAPNPGPLFAVTGFFSLLSAPFGGHAVNLAAITAAMCAGPDAHPDPAKRYWAAINAGIFYVIFGLAAGAVTAFVALAPPILIQAVAGLALISAFAASALNAFRETEGREAAAVTFLVTASGVSFAGISGAFWGLIAGGLMLALSRFVASLRK*