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SCNpilot_expt_1000_bf_scaffold_8460_4

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(3270..4340)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CAY7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 356.0
  • Bit_score: 676
  • Evalue 1.10e-191
  • rbh
Diguanylate cyclase {ECO:0000313|EMBL:EYR79131.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 356.0
  • Bit_score: 676
  • Evalue 1.50e-191
diguanylate cyclase; K13590 diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 355.0
  • Bit_score: 497
  • Evalue 3.70e-138

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGAACACGGCAGTTGCGCAGAAGGTCCAGGTGCCGGACATCGCGGCACAGGTGACTTACGCCATGCGCATAATGGGCGTTTCTCCCATCCCGCGGAATTACGAGCTGTTCTACGAAGCCTATATCGGCTCCAATCCCAAGCTGACGCGGGAACTCGCCGCCCTCGGCAGCAAGGCCTCGCAGGAGGAACTGGACGAGATCGGCGCGCAATATTTCGGCCATCACCACGGCGCAACCGCCATCGACGGCGTGCACACCAAGATCGTCGGCGAACTGGAGGGCCTGCTGCGCCTTCTGCGGCAGGAGCAGACCTCGCTCGAAAGCTACAACAGGCTGCTCGACGAGACCTTCGTGCGCATCAACGGCAAGAACGCCACAAGCGTCGACATCATCAAGAGCGTCATCGGCGTCCTCACGCAGGCCACCGGCGACACCATCACCCAGGGCAAGGAGATGGTCGAGAATGTCACGCAGAAATCGCTCGAGATGGAAAACGTCCGCAAGGAGCTGGACGAGTACAAGCGCATCGCCAACACCGACTCGCTGACGCAGCTCTCCAACCGCCGCGCCTTCGACGACAAGCTCTCGGCCATCTACAATTCTTCGATGTCGCGCAACGTCACCGCGCTGATCCTCGCCGACATCGACCATTTCAAGAAGATCAACGACACCTACGGCCACCCGGTCGGCGACAAGATCCTCGCCTCCGTCGGCAGCCTGATCCGTGCCAATGTGCGCAAGGACATCCTCGTCGCCCGCACCGGCGGCGAGGAGTTCGCCATGATCGTGGAAGGCAACACCGAGGAAGAGGCGATGGCGATCGCCGAGCGCATCCGCATCGCGCTGGAGCACACGCCCTTTAAGAATTCCAAGACCGGCGTCAACTACGGCCCCATCACCATCTCACTCGGCCTGTGCATGGCCTCCTGGGCGGAAGGCCCGGGCGAACTCTATTCCAAGGCCGACATCGCCCTTTATTGTGCCAAGAACGGCGGCCGGAACAGGACGATGCCTTTCGAGGACGGCATGAAGAAGGATTTCGTCAAGAGCTGGCTCATTTACCGCAAGTAA
PROTEIN sequence
Length: 357
MNTAVAQKVQVPDIAAQVTYAMRIMGVSPIPRNYELFYEAYIGSNPKLTRELAALGSKASQEELDEIGAQYFGHHHGATAIDGVHTKIVGELEGLLRLLRQEQTSLESYNRLLDETFVRINGKNATSVDIIKSVIGVLTQATGDTITQGKEMVENVTQKSLEMENVRKELDEYKRIANTDSLTQLSNRRAFDDKLSAIYNSSMSRNVTALILADIDHFKKINDTYGHPVGDKILASVGSLIRANVRKDILVARTGGEEFAMIVEGNTEEEAMAIAERIRIALEHTPFKNSKTGVNYGPITISLGLCMASWAEGPGELYSKADIALYCAKNGGRNRTMPFEDGMKKDFVKSWLIYRK*