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SCNpilot_expt_1000_bf_scaffold_9591_9

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 5182..5448

Top 3 Functional Annotations

Value Algorithm Source
Flagellar biosynthesis pathway, component FliQ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5R3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 88.0
  • Bit_score: 163
  • Evalue 1.30e-37
Flagellar biosynthesis pathway, component FliQ {ECO:0000313|EMBL:EYR80395.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 88.0
  • Bit_score: 163
  • Evalue 1.80e-37
fliQ; flagellar biosynthetic protein FliQ similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 88.0
  • Bit_score: 153
  • Evalue 3.30e-35

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
GTGAATGAGGCAGACGCCCTCGACATAGCACAGGCAGCCATCTGGACGGTCATCGTGGCCTCCGGTCCGGCCGTCCTTGCCGCGATGATCGTGGGCGTCGCCATCGCCTTCATCCAGGCGCTGACCCAGGTGCAGGAAATGACCCTCACCTTCGTGCCCAAGATTCTCGCGATCTTCGTCACGATCGCCATCTCGGCCCCCTTCATCGGCGCCCAGATCTCCATCTTCACCAATCTCGTCTTCTCGCGCATAGAAAGCGGCTTCTAG
PROTEIN sequence
Length: 89
VNEADALDIAQAAIWTVIVASGPAVLAAMIVGVAIAFIQALTQVQEMTLTFVPKILAIFVTIAISAPFIGAQISIFTNLVFSRIESGF*