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SCNpilot_expt_1000_bf_scaffold_7933_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 974..1825

Top 3 Functional Annotations

Value Algorithm Source
2-oxoglutarate dehydrogenase E1 component SucA {ECO:0000313|EMBL:EYR79707.1}; EC=1.2.4.2 {ECO:0000313|EMBL:EYR79707.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 275.0
  • Bit_score: 530
  • Evalue 1.40e-147
sucA; 2-oxoglutarate dehydrogenase E1 componentSucA (EC:1.2.4.2) similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 275.0
  • Bit_score: 470
  • Evalue 3.90e-130
2-oxoglutarate dehydrogenase E1 componentSucA n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XDY6_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 275.0
  • Bit_score: 470
  • Evalue 1.20e-129

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGGCACGGCAAGACGTCAACGAACAATTCCTGGCCACGTCCTTCCTCGACGGGGCGAACGCAGCCTATATCGAACAGCTCTATGCCAGCTACGAGGCGAATCCCGCCTCCGTCGGCGAGGAATGGCAGGCCTTCTTCAAGGCCCTCGAGGACCAGCCCTCCGACGTGATCAAGGCGGCCCGGGGCGCCTCGTGGAAGCGCGCGAACTGGCCGATCGCCGCCAACGGCGAACTCGTCTCGGCGCTCGACGGCAACTGGGGCGTGGTCGAGAAGGTTCTCGAAAAGAAGGTGCAGGCGAAGGCCGAGGCCGTCGCCGCGCAGACCGGCACGCCGGTCAACCAGGCCGACGTCAACCAGGCGACCCGCGATTCGGTGCGCGCCATCATGATGATCCGCGCCTACCGCGCCCGCGGCCACCTGCACGCCAAGCTCGACCCGCTTGGCATCGCCGCTCCGGTCGAGGACTATCACGAGCTTTCGCCGTCGAACTACGGTTTCGAGGAGAAGGATCTCGACCGCAAGATCTTCATCGACAACGTGCTCGGCCTCGAATACGCCACCGTGCGCGAAATGGTCGAAATCCTCGAGCGCACCTATTGCTCGACCATCGGCGTCGAGTTCATGCATATCTCCAACCCGGAAGAGAAGGGCTGGATCCAGGAGCGCATCGAAGGCCCGGACAAGGGCGTCGACGTCACCGTCGAAGGCAAGAAGGCGATCCTGCAGAAGCTGATCGAGGCGGAAGGCTTCGAGCAGTTCATCGACGTCAAGTACAAGGGCACCAAGCGCTTCGGCCTCGACGGCGGCGAAGCGCTGATCCCGGCGCCAAGCGCGGCGGCCAGATGGGCCTGA
PROTEIN sequence
Length: 284
MARQDVNEQFLATSFLDGANAAYIEQLYASYEANPASVGEEWQAFFKALEDQPSDVIKAARGASWKRANWPIAANGELVSALDGNWGVVEKVLEKKVQAKAEAVAAQTGTPVNQADVNQATRDSVRAIMMIRAYRARGHLHAKLDPLGIAAPVEDYHELSPSNYGFEEKDLDRKIFIDNVLGLEYATVREMVEILERTYCSTIGVEFMHISNPEEKGWIQERIEGPDKGVDVTVEGKKAILQKLIEAEGFEQFIDVKYKGTKRFGLDGGEALIPAPSAAARWA*