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SCNpilot_expt_1000_bf_scaffold_9999_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(2..454)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system periplasmic component n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YHN3_MESOW similarity UNIREF
DB: UNIREF100
  • Identity: 32.0
  • Coverage: 128.0
  • Bit_score: 61
  • Evalue 1.20e-06
D-ribose transporter subunit RbsB {ECO:0000313|EMBL:CDQ42579.1}; Flags: Precursor;; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.2
  • Coverage: 152.0
  • Bit_score: 72
  • Evalue 5.60e-10
sugar ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 128.0
  • Bit_score: 61
  • Evalue 3.80e-07

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Taxonomy

Mycobacterium neoaurum → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGAAGGGTACTATTCTGGGGGCAGCCCTCATGGCCTGCGCATCCTGTGCGACGCTTGCCGCAGCCGATGACTTCAAGGGACCGACCGAGCCGGCCAAGGCGCCGGCGCAGTTGAACGTCACCGTGATCACCTGCTTTTCGGTCCTGCATGGCTGCGTCGCACCGGCGGACGCGATCAGCGAAATCGGCAAGAATCTCGGCTGGAAGGTCACGGTGCTCGATGGCGGCGGCAATGCGCGCCAGCAGAACGCGGCCATGCTGGACGCCGTCTCGTCGGGCGCCGATGTCATCGCCAATATTGCCATCGATCCCAACCTGGTCCAGCTCGGTCTGGCTGCGGCCGAGAAGGCGAACATTCCGGTGGTTTCCGGCTCCAACGGCATAGATACGCCCAATCCGGTCGCAAAGCCTGCGGAAGGTGCTCTGACTTACGCTTTCGACGTCGCCCCCGAT
PROTEIN sequence
Length: 151
MKGTILGAALMACASCATLAAADDFKGPTEPAKAPAQLNVTVITCFSVLHGCVAPADAISEIGKNLGWKVTVLDGGGNARQQNAAMLDAVSSGADVIANIAIDPNLVQLGLAAAEKANIPVVSGSNGIDTPNPVAKPAEGALTYAFDVAPD