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SCNpilot_expt_1000_bf_scaffold_9902_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 3..878

Top 3 Functional Annotations

Value Algorithm Source
fadB; enoyl-CoA hydratase; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 293.0
  • Bit_score: 496
  • Evalue 5.20e-138
Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0H9B9_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 293.0
  • Bit_score: 497
  • Evalue 7.40e-138
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EYR83171.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 291.0
  • Bit_score: 552
  • Evalue 2.70e-154

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
CCGATCACCGGCCTTGCGAAGAACTCGAAGCGCCCGGGCCAGTTCATCGGCATCCACTTCTTCTCGCCGGTCGACAAGATGATGCTGGTGGAGGTGATCCTCGGCAAGGAGACGGGCGACAGGGCGCTCGCCACCGCGCTCGACTATGTCGCAGCCATCAGGAAGACGCCGATCGTCGTCAACGACACACGCGGCTTCTACGTCAACCGCTGCGTCTTCCGCTACATGGCCGAAGCCTACGACATGCTGATCGAGGGCGTGCCGGCGGCGATGATCGAGAATGCCGCCAAGATGGCGGGCATGCCGGTCGGGCCGCTCTCGCTCAACGACGAGGTCGCCGTCGATCTCTCCTACAAGATCTTCAAGGCCTCGATCGCCGATCTCGGGTCCCAGTCCGTCGATCCGCGCCACATGGAGCTGGTCACGAAGCTGGTGGAAGGCGAAGGCCGCCTCGGCCGCAAGGCCGGCAAGGGCTTCTACGACTACCCGCCGAAGCCGGCCAAGAAGAAGCTGTGGCCGGGCCTGAAGGACCTCTACCCGCAGCTCAAACCCGAGGATGTCGATATCAAGGTGATCAAGGAGCGCCTGCTCGTCACCATCGCACTGGAAGCGGCCCGCACCATGGAAGAGGGCATTGTCACCGATCCGCGCGAGGCCGATGTCGGCTCCATCCTCGGCTTCGGCTTCGCGCCCTATACCGGCGGCACGCTCTCCTATATCGACGGCATGGGCGTGAAGACCTTCGTCGCGCTCTGCGAGAAGCTCGCCGCGAAATACGGCAGCCACTTCCAGCCGACGCCGCTCCTCAAGGACATGGCCGCCAAGGGCGAGACCTTCTACACCCGCTTCGCGCCGGAGACGAAGAAGGCGGCCTGA
PROTEIN sequence
Length: 292
PITGLAKNSKRPGQFIGIHFFSPVDKMMLVEVILGKETGDRALATALDYVAAIRKTPIVVNDTRGFYVNRCVFRYMAEAYDMLIEGVPAAMIENAAKMAGMPVGPLSLNDEVAVDLSYKIFKASIADLGSQSVDPRHMELVTKLVEGEGRLGRKAGKGFYDYPPKPAKKKLWPGLKDLYPQLKPEDVDIKVIKERLLVTIALEAARTMEEGIVTDPREADVGSILGFGFAPYTGGTLSYIDGMGVKTFVALCEKLAAKYGSHFQPTPLLKDMAAKGETFYTRFAPETKKAA*