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SCNpilot_expt_1000_bf_scaffold_9902_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(2044..2490)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CA56_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 148.0
  • Bit_score: 289
  • Evalue 2.70e-75
Response regulator receiver protein {ECO:0000313|EMBL:EYR83178.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 148.0
  • Bit_score: 289
  • Evalue 3.70e-75
two component response regulator similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 145.0
  • Bit_score: 245
  • Evalue 8.10e-63

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGAACGGACTTGGCAAGGAAGTCACCATCGTCATGGTCGAGGACGACGAGGGCCATGCGCGCCTCATCGAGAAGAATATCCGCCGCGCCGGCGTGCACAACGAGGTCGTGCCCTTCACCAACGGCACGGACGCGCTCGATTTCGTGCTCGGCAAGGACCGTTCCGGCCTGGCCAGCGCCGGCAAGTTCCTGCTGATCCTGCTCGATCTCAACCTGCCCGACATGTCCGGCATCGACATCCTGCAGAAGATCAAGTCAAATACCCACACCAAGCGCCTGCCGGTCGTCATCCTCACCACGACCGACGACGAGCGCGAGATCCAGCGCTGCTACGATCTCGGCGCGAATGTCTACATCACCAAGCCGGTGGAATACGAGAGCTTCGCCCACGCGATCCGCCAGCTCGGCCTGTTCTTTTCCGTGATCCAGATACCCGAGACGCAATAA
PROTEIN sequence
Length: 149
MNGLGKEVTIVMVEDDEGHARLIEKNIRRAGVHNEVVPFTNGTDALDFVLGKDRSGLASAGKFLLILLDLNLPDMSGIDILQKIKSNTHTKRLPVVILTTTDDEREIQRCYDLGANVYITKPVEYESFAHAIRQLGLFFSVIQIPETQ*