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SCNpilot_expt_1000_bf_scaffold_11620_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 771..2195

Top 3 Functional Annotations

Value Algorithm Source
Aminotransferase class-III n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTM7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 474.0
  • Bit_score: 873
  • Evalue 1.40e-250
  • rbh
Aminotransferase class-III {ECO:0000313|EMBL:EYR81722.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 474.0
  • Bit_score: 873
  • Evalue 1.90e-250
class III aminotransferase similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 474.0
  • Bit_score: 703
  • Evalue 4.50e-200

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1425
ATGGCGGCAATTGCGAAGGCCGGGGACGAGGGCAGGCGCGCGGAGGGCGCGGCGGCCGACGAGGTGACCCGGCTTGCCGAGCGCCATCTGGTGCAGCCCTGGCCGGTGTCCGGCTCCATCGGCGCGGAGGCGCGCGGGCGCATCGAGGCCGGCGACGGCATCTACGTGACGGACGCGGCCGGCCGCCGGCTGATCGACGGTCCCGCCGGCATGTGGTGCGTCAATGCCGGGCATCGCAACAGGGCGCTGGCTGACGTGATGGCCACGCAGGCGATGGAGCTTTCCTACAATTCGCCGTGGTACACGACGAACGCGCCGTCCGCCGTGCTCTCGGCGCGGCTGGCGGGCCATGCGCCCGAGGGCGTCGACCATGTGTTCTACACGACGGGTGGTTCCTCGGCGGTCGAGACGGCGCTGCGCTTCATGCAGTTCGCCAACAATGTGAAGGGGCGGCCGGAGAAGAAGCTGATCGTTTCCCGGCAGGGCGGCTACCATGGCTCGACCTACCTGTCCGCCTCGCTCAACGGCCGGCCGCGCGACCATGACTGGATGGACAGCGCCGGTGATCTCGTCGTCAAGCTCTCCTGCCCGGACCCGTTCCGCCGGCTCGATGGCATGACGGTCGGGGCCTTCTGCGACTTTCTCGTCGAAGAGTTCCGGGCGGTCATCGAGGAGAGGGGGGCGGACAAGATCGGCGCCTTCATCGCCGAGCCCGTCATGGCCTCCGGCGGTGTCATCGTGCCGCCCGCCGGCTATCTCGAGCGCATGCACGCGCTCTGCCGCGCAAACGACATTCTCTTCATCGCCGACGAGGTGGTGACGGCCTTCGGCCGCCTCGGCCACGTCTTCGCCTCGAAGGACGTCTTCGGCATCGAGCCCGACATGATCACCTTCGCCAAAGGCGTGACGTCGGGTTATTTCCCGCTCGGCGGGGTGATGATCGCCGGGCGGCTGTTCGAGGAACTGCGCCGCTCGAACCATTCCGAGGCGATGTTCGCGCACGGGCTCACCTATTCCAGCCATCCGGTCGGCTGCGCGGTGGCGCTGAAGAACCTCGACCTCCTGGAAGGCGGGCTGCTGGAGCATACGCGGGCGGTTTCGGACCATTTCCAGCGGAGCCTCAAGGCGCTTGAGGACCTGCCGCTGGTCGGCGAGGTGCGCGGGCTGGGGCTGATGGCCTGCGTCGAATGCGTCGCCGACCGCGACAGCAAGAACCCGCTGACGCTCGACCTCGAAGTCGGCAAGCGCATCGACCGGCACTGCCAGGACCTCGGCCTTCTCGTGCGCCCGCTCATCAACATGTGCGTGATGTCGCCGCCGCTGACCATCTCGACGGCGCAGATCGACGACATGGCGGCGATCCTGCGCCGGGGCATCGAGCTGACAATGGACGATCTTGCCCGCGAGGGGCTGTGGAAGGGCTGA
PROTEIN sequence
Length: 475
MAAIAKAGDEGRRAEGAAADEVTRLAERHLVQPWPVSGSIGAEARGRIEAGDGIYVTDAAGRRLIDGPAGMWCVNAGHRNRALADVMATQAMELSYNSPWYTTNAPSAVLSARLAGHAPEGVDHVFYTTGGSSAVETALRFMQFANNVKGRPEKKLIVSRQGGYHGSTYLSASLNGRPRDHDWMDSAGDLVVKLSCPDPFRRLDGMTVGAFCDFLVEEFRAVIEERGADKIGAFIAEPVMASGGVIVPPAGYLERMHALCRANDILFIADEVVTAFGRLGHVFASKDVFGIEPDMITFAKGVTSGYFPLGGVMIAGRLFEELRRSNHSEAMFAHGLTYSSHPVGCAVALKNLDLLEGGLLEHTRAVSDHFQRSLKALEDLPLVGEVRGLGLMACVECVADRDSKNPLTLDLEVGKRIDRHCQDLGLLVRPLINMCVMSPPLTISTAQIDDMAAILRRGIELTMDDLAREGLWKG*