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SCNpilot_expt_1000_bf_scaffold_10351_4

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(2505..3536)

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine transport ATP-binding protein OpuAA {ECO:0000313|EMBL:EYR77791.1}; EC=3.6.3.32 {ECO:0000313|EMBL:EYR77791.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 347.0
  • Bit_score: 644
  • Evalue 1.10e-181
Glycine betaine transport ATP-binding protein OpuAA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CU63_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 347.0
  • Bit_score: 644
  • Evalue 7.50e-182
  • rbh
Putative ABC-transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 347.0
  • Bit_score: 556
  • Evalue 6.50e-156

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGGTTAGTCATGCAATCGAGGTCCGCAATCTCTACAAGATCTTCGGACCTCGCGGCGCGGATTACGTCGATGCCGTGAAGAACGGCTTGGGCAAGGCGGAGTTGAACCAGAAGTACGGTCATGTGCTGGGGCTTCGCGACATCAACATCTCCATGCCCGCCGGCGGCATCATGGTGGTCATGGGCCTTTCCGGCTCCGGCAAGTCGACGCTGATCCGCCACATCAACCGGCTGATCGACCCGACCGCCGGCGAAGTGCTCTACGACGGCGTCGACGTGTGTCGCATGAACGAGAGCGACCTTCGGGACTTCCGCCGCCACAAGACGGCGATGGTCTTCCAGAAGTTCGCGCTGCTGCCGCACCGCACCGTTCTGGAAAACACGGTCTACGGCCTGGAGATCCAGGGCGTCGCCGCCGCCGAACGCGAAAAGCGCGCCCAGGAATGGATCGCCCGCGTCGGCCTCGCCGGCTTCGAGAACCATTATCCGAACCAGCTTTCGGGCGGCATGCAGCAGCGCGTGGGCCTTGCCAGAGCGCTGACCAACGATGCCGACATCCTTCTGATGGACGAAGCCTATTCGGCGCTCGACCCGCTGATCCGCGTCGACATGCAGACCGTGCTGCTCGACCTCCAGAAAGAGCTCAAGAAGACGGTCGTCTTCATCACGCACGACCTGCGCCTCGGCGACAAGATCGCCATCCTGCGCGACGGCATGGTCGTGCAGCAGGGCACCGGCCAGGAGATCGTGCTGAACCCGGCGGACGAATACATCACGGCCTTCGTCAAGGAAGTGAACCGCGGCCGCGTGGTCAATGTCGAGACGATCATGGCCCCGCTCTCCGGCAACCCGGAAGGCATGCCGATCACCAAGGGCACCGTGCTGGAAACCGCCGCCCGCGCCATGACCGCCGCCAACCAGACGCTCGCCCATGTGGTCGACGAGGCCGGCAAGCCGATCGGCGCGGTCAGCCTCAGCGCGATCATCGCCGCCATGGTGACGCAGACGAGCCACGAGGCGAAGGCGGCCTGA
PROTEIN sequence
Length: 344
MVSHAIEVRNLYKIFGPRGADYVDAVKNGLGKAELNQKYGHVLGLRDINISMPAGGIMVVMGLSGSGKSTLIRHINRLIDPTAGEVLYDGVDVCRMNESDLRDFRRHKTAMVFQKFALLPHRTVLENTVYGLEIQGVAAAEREKRAQEWIARVGLAGFENHYPNQLSGGMQQRVGLARALTNDADILLMDEAYSALDPLIRVDMQTVLLDLQKELKKTVVFITHDLRLGDKIAILRDGMVVQQGTGQEIVLNPADEYITAFVKEVNRGRVVNVETIMAPLSGNPEGMPITKGTVLETAARAMTAANQTLAHVVDEAGKPIGAVSLSAIIAAMVTQTSHEAKAA*