ggKbase home page

SCNpilot_expt_1000_bf_scaffold_10351_11

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 7970..9625

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI000367389B similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 391.0
  • Bit_score: 197
  • Evalue 3.00e-47
Putative peptidoglycan-binding domain-containing protein {ECO:0000313|EMBL:EYR80628.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 605.0
  • Bit_score: 745
  • Evalue 7.10e-212
Tb04.3M17.610; hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 447.0
  • Bit_score: 184
  • Evalue 1.10e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1656
ATGGGTTCTGGATCTCTCGCACGTTCCGTTCTGGCCGGCCTTGTGGGGCTGTCGCTGGCCGGCCCTCCGGCCGTCGCCTTCGCCCAGGGCGCCAAGGAGGCCACGAGCGCCGGCAAGCGCTGGGAGGAGGAGTTCTCCTTCTGGCAGAGGGCATCCTCCGGCAACGACGTCGCGCAGTACGAGGCCTATCTGAAGCAATATCCGAACGGCACCTTCGCCTCGATGGCGCGCCTGCGCGTCGCCGAATTGCAGGCGGCCGCCCGCACCAAGGAGGCCCAGGCCGCCACCGATGACGGGGCCGCCAAGGTGAAGGCCGCGGATGCGCAAAAGGCCGAGGAGGCGAAGAAGGCTGCCGAAGCCGACAAGGCGAAGGCCGGCGAGGAGGACCGCAAGGCCGCCGAGGCCCGCAAGGCGGAAGAAGAGGCCGCGCGCCTGAAGGCGCAGGCCGAGGCGAAGAAGGCCGGGGAAGCCGCCGCCGCCCGCAAGCTCGCCGAGGACAAGGCCGCGGCGGACGCAAAGGCGAAGGCCGAGGCTGCCGCTGCGGAAAAGGCCCGCGCGGATGAGGCGGCCCGTCTCAAGGCTGAAGCTGCGAAGACGGAGGCCGACGCCCGCAAACGCGCCGAGGAGCAGGCTGCCGAGGCCGAGCGGCTGAAAAAGGAAGCACAGGCCGCCGCCGACAAGGCCAGGGCGGAGGAAGTCGCGCGCGTGAAGGCCGAGGCGGACCGGAAGAAGGCCGAGGAGGCCGCCGCAGCGGAAAAGGCGCGTGCCGAACAGGAAGCGGCCGCCCGCCGCGAGGCCGAGGCAAAGCGCGCCGAAGCGGAAAAGGCCGCGGCCGCCGAGAAGGCGCGCATCGAGCAGGAAGCCGCTGCCGCCCGCAAGCTTGCGGACGAGAAGGCCACCGAGGTGGAGCGCCTGAAGGCGGAGGCCGCAAGGGCCGCGGCCGATGCCGAAGCCAAGGCCGCCGAGGCCGCCCGGCTTGCGAAGGAAGCGGAAAAGCGCGCCGAGGAGGCTGCTGCCGCCCGCCGGAAGGCGGAGGGTGCCGCCGCCGGCGGCACGTCGCAGGACGTGCGCAGGACAGACGGCGCCGCTGCCGCCGGGAAGGCGGATGCGGCCAAGCGCGAGGAAGAGACCTTTCAGAAGGCCGTGGTCGACGGGTCCGAGAAGGCCTTCCGCGGCTATATCGCCGCCTATCCGAACGGCCGCTTCGTCGCCGATGCCCGCGAGCGCCTCGCCGCGCTTTCGAAGGCGGGGACGGAAACCACGGAGACCCGGCGCAAGATGGAAGAGCCGGTCGTCGATCCGCGCGAAGCCTATATGGACCGCTCGGTCCGCATCCAGGCGCAGCGCTGGCTGAGCGCCCTCGGCTACAACACCTATGGTGCCGACGGCGTCTTCGGCCCGCGCACCCGCTCGGCGATCGCCGCCTGGCAGGGCTCGTCCGGCTATCGTGCCAACGGCTATCTCACCCGCCAGCAGTACCGGATGCTGCGCGAGGCGGCGCAATATGCCGAGACCCGGCAGAATCGCCAGCGGCGCTACCAGCGCGGCTACGATGTGCTGGAGGGCCCTGTCGACGACTACTATGACGGCCCGTACTATCGCGACGACGGCTATTACCGCCGCCGTGGCGGGGTGGTGATCATCCCCGGCTATTGA
PROTEIN sequence
Length: 552
MGSGSLARSVLAGLVGLSLAGPPAVAFAQGAKEATSAGKRWEEEFSFWQRASSGNDVAQYEAYLKQYPNGTFASMARLRVAELQAAARTKEAQAATDDGAAKVKAADAQKAEEAKKAAEADKAKAGEEDRKAAEARKAEEEAARLKAQAEAKKAGEAAAARKLAEDKAAADAKAKAEAAAAEKARADEAARLKAEAAKTEADARKRAEEQAAEAERLKKEAQAAADKARAEEVARVKAEADRKKAEEAAAAEKARAEQEAAARREAEAKRAEAEKAAAAEKARIEQEAAAARKLADEKATEVERLKAEAARAAADAEAKAAEAARLAKEAEKRAEEAAAARRKAEGAAAGGTSQDVRRTDGAAAAGKADAAKREEETFQKAVVDGSEKAFRGYIAAYPNGRFVADARERLAALSKAGTETTETRRKMEEPVVDPREAYMDRSVRIQAQRWLSALGYNTYGADGVFGPRTRSAIAAWQGSSGYRANGYLTRQQYRMLREAAQYAETRQNRQRRYQRGYDVLEGPVDDYYDGPYYRDDGYYRRRGGVVIIPGY*