ggKbase home page

SCNpilot_expt_1000_bf_scaffold_10351_13

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 10308..11432

Top 3 Functional Annotations

Value Algorithm Source
cobalt transporter n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036C535B similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 233.0
  • Bit_score: 328
  • Evalue 7.60e-87
  • rbh
Putative cobalt transporter subunit CbtA {ECO:0000313|EMBL:EYR80630.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 232.0
  • Bit_score: 407
  • Evalue 1.80e-110
cbtA; putative cobalt transporter, subunit CbtA similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 231.0
  • Bit_score: 321
  • Evalue 5.00e-85
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGATCGTTCGTTATCTCCTGGCCGCCCTGGTGGCCGGGCTGTTCTCCGGCGCCCTCATGACGGCCGCCCAGGAGGCGCGTGTCGTGCCGCTCATCCTGCACGCCGAGGAATTCGAGGGTGAGGCGGCGGCTCCTGCCGGTGAGGGCACGACGCCGTCGGCCGACGGTGCCGTCCAGACGCAGGAGCATTCCTCGCTCGGCGCGGCCATCCTCGACGTCGCCGCCTATCTGTCGCCCGTTTCCGTCGCCCAGGCCCATGACGGCGAGGGCCACGAGGAGGGCGGCATCATGTTCGGCATGAGCCGCTTTTCCGGCACGCTGCTTGCAAATCTCGTGACGGGCACCGGCTTTGCGCTCCTGCTCGCCGGCTTCAGCCTGGTTTCCGGCCATCCGATCACCGTTGCCAACGGTGCGCTGTGGGGTGCCGCCGGCTGGCTTGCCGTGCACATGCTGCCGGCCATCGGCCTGCCGCCGGAGCTTCCGGGCTTCCCTGCCGCCGATCTCGGCGACCGCCAGGTGTGGTGGATCGCAACCGTCATCCTGTCGGCGGCCGGCCTCTACCTGCTGGTCCTCAAGCCGAACATCGTCGCCAAGGTCATCGGCATTGCGCTGATCGCGGCGCCGCAGGTCTATGGCGCCCCGCAGCCCAGCGACATTTCCAGCAACGTTCCGGCCGTGCTCGGCGCGTGTTCTTCTGGATCGTGCTCGGCCTGTCGCTGGGCTTTGCCAACGAGAAGATCGCCAGGGCTGACTGACATGAAGACGACATCGCCCGGAGCCGTCCTGGTTCTGGGCGGTGCACGTTCCGGAAAATCCGCCTTTGCCGAAAGACTGGTCGCCGAAACCGGTCTTTCGCGCCATTATATCGCCACCGGTCGCGCTTTCGATGACGAGATGCGCCAGCGCATCGCCAGGCACCGGGAAGATCGCGGAAGCGGGTGGCAGACGCATGAGGAGCCGCTGGCGCTCGCCGATCGCATCGCCGCGGTGGCGCGCGCGGACCGCGCGGTGCTGGTCGACTGCCTGACGCTGTGGGTCACGAACCTGATGCTGGAGGAGCGCGACATCGCCGCCGAATTTACCGGCCTTCTCGCCGCGATCGCGGCGGCGCCGGGCCGGCTGGTC
PROTEIN sequence
Length: 375
MIVRYLLAALVAGLFSGALMTAAQEARVVPLILHAEEFEGEAAAPAGEGTTPSADGAVQTQEHSSLGAAILDVAAYLSPVSVAQAHDGEGHEEGGIMFGMSRFSGTLLANLVTGTGFALLLAGFSLVSGHPITVANGALWGAAGWLAVHMLPAIGLPPELPGFPAADLGDRQVWWIATVILSAAGLYLLVLKPNIVAKVIGIALIAAPQVYGAPQPSDISSNVPAVLGACSSGSCSACRWALPTRRSPGLTDMKTTSPGAVLVLGGARSGKSAFAERLVAETGLSRHYIATGRAFDDEMRQRIARHREDRGSGWQTHEEPLALADRIAAVARADRAVLVDCLTLWVTNLMLEERDIAAEFTGLLAAIAAAPGRLV