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SCNpilot_expt_1000_bf_scaffold_10458_7

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(5021..5626)

Top 3 Functional Annotations

Value Algorithm Source
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 201.0
  • Bit_score: 396
  • Evalue 2.30e-107
NADH dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 199.0
  • Bit_score: 348
  • Evalue 1.60e-93
NADH-quinone oxidoreductase subunit C n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYS4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 201.0
  • Bit_score: 396
  • Evalue 1.60e-107
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGAGCGAAGCCCTCCAGGAGCTTTCCTCCCATATCGGCGAAGCGGCCGGCGGTCTCGTCGCCTCCGCCGATATCGCCTTTGGCGAACTCACCCTGAAGACGGACGGCGCCCGCGTCGTCGAGCTTCTGACCTTCCTGCGCGACGACGTGCAGTGCGGCTTCGTCAACCTCATCGACATCTGCGGTGTGGACTGGCCGGCGCGCGCCGAGCGCTTCGACGTGGTCTACCACCTCCTGTCGCCGCGCCAGAACCTGCGCATCCGCGTCAAGGTTGCCGTGGCCGAGGACCAGCCCGTTCCGTCCGCCTGCTCGGTCTATCCGGGCGCCGACTGGTTCGAGCGCGAAGCCTACGACATGTACGGCATCCTCTTTACCGGCCACCCGGACCTGCGCCGCATCCTCACCGACTACGGTTTCGAGGGGCATCCGTTGCGCAAGGACTTCCCGACGACCGGCTTCGTGGAAGTGCGTTATGACGACGAGGTCAAGCGCGTCGTGTACGAGCCTGTCGAGCTGAAGCAGGAATTCCGCAACTTCGACTTCCTCTCTCCCTGGGAAGGCACGGACTATGTGCTGCCGGGCGACGAGAAGGCGAAGACGAACTGA
PROTEIN sequence
Length: 202
MSEALQELSSHIGEAAGGLVASADIAFGELTLKTDGARVVELLTFLRDDVQCGFVNLIDICGVDWPARAERFDVVYHLLSPRQNLRIRVKVAVAEDQPVPSACSVYPGADWFEREAYDMYGILFTGHPDLRRILTDYGFEGHPLRKDFPTTGFVEVRYDDEVKRVVYEPVELKQEFRNFDFLSPWEGTDYVLPGDEKAKTN*