ggKbase home page

SCNpilot_expt_1000_bf_scaffold_10910_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 1592..2332

Top 3 Functional Annotations

Value Algorithm Source
3-oxoacyl-(acyl-carrier-protein) reductase protein (EC:1.1.1.100) similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 246.0
  • Bit_score: 416
  • Evalue 5.80e-114
Putative short-chain dehydrogenase/reductase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUR7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 246.0
  • Bit_score: 458
  • Evalue 3.20e-126
  • rbh
Putative short-chain dehydrogenase/reductase {ECO:0000313|EMBL:EYR78832.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 246.0
  • Bit_score: 458
  • Evalue 4.50e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGAGCATCGACCTGAAGGGCCGCCTCGCGCTGGTCACCGGCGCCTCGCGCGGCATCGGCTATTTCACCGCCCTCGAACTGGCAAAGGCCGGCGCGCATGTCGTCGCCTGCGCCCGCACCGTCGGAGGGCTGGAGGAACTGGACGATGCGATCAAGGCCGTCGGCGGCAGCGCGACGCTGGTGCCCTTCGACCTCGTCGACATGGCGGCCATAGACAAGCTCGGCGGCTCGATCTTCGAGCGCTGGGGCAAGCTCGACATCCTCGTCGCCAATGCCGGCGTGCTCGGCACGATCTCGCCCATCGGCCATGTCGAGGCGAAGGTCTTCGAGAAGGTGATGACCATCAACGTCATCGCGACATGGCGGCTCATCCGCTCGGTCGAGCCGCTGCTCCTGAAGTCCGATGCCGGCCGCGCCGTCATCCTCTCCTCCAGCGCCGCGCACAAGTGCAAGCCCTTCTGGGGGCCCTACTCGGCCTCCAAGGCCGCCGTCGAAGCGCTCGCCCGCACCTGGGCCGGCGAGACGCAGCGCACGGCGCTGCGCATCACCTCGCTCGACCCTGGCGCCACCCGCACCGCCATGCGCGCGCAGGCCATACCGGGCGAAGACCCTTCGACGGTGCAGCATCCTTCCGAGGTGGCGAAGGCCATCCTGTCGCTGGTCTCGCCGGATTTCACGGAGACGGGCAAGCTCTTCGACATGCGCCAGGGGCGCCTGCTGGACTACCGGCTGCCGGATTGA
PROTEIN sequence
Length: 247
MSIDLKGRLALVTGASRGIGYFTALELAKAGAHVVACARTVGGLEELDDAIKAVGGSATLVPFDLVDMAAIDKLGGSIFERWGKLDILVANAGVLGTISPIGHVEAKVFEKVMTINVIATWRLIRSVEPLLLKSDAGRAVILSSSAAHKCKPFWGPYSASKAAVEALARTWAGETQRTALRITSLDPGATRTAMRAQAIPGEDPSTVQHPSEVAKAILSLVSPDFTETGKLFDMRQGRLLDYRLPD*