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SCNpilot_expt_1000_bf_scaffold_12212_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(866..3760)

Top 3 Functional Annotations

Value Algorithm Source
Sarcosine oxidase subunit alpha {ECO:0000313|EMBL:EYR80531.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EYR80531.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 964.0
  • Bit_score: 1879
  • Evalue 0.0
soxA1; sarcosine oxidase, alpha subunit; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1] similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 964.0
  • Bit_score: 1691
  • Evalue 0.0
Sarcosine oxidase subunit alpha n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETI5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 964.0
  • Bit_score: 1879
  • Evalue 0.0
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2895
GATACCGTCGCCTCCGCGCTGCTCGCCAACGGCGTGCATCTCGTCTGCCGTTCCTTCAAGTACCACCGCCCGCGCGGCATCCTGTCCGCCGGCGCGGAAGAGCCGAACGCGCTGGTCGACGTCTCGCGCGATGCCGCGCGCCGCCAGCCGAACGTGCGCGCGCCGGTGCAGGAAGTCTTCGACGGCATGAAGGTGGAATCGCAGAACCGCTGGCCGTCGCTCGCCTTCGATATCGGCGGCGTCAACAACCTGATGTCGCCCTTCTTCGCGGCCGGCTTCTACTACAAGACCTTCATGTGGCCGAAGGTCGCCTGGGAAAAGGTCTACGAGCCCTTCATCCGCAAAGCCGCGGGCCTTGGCGTCGCGCCGACGGAGGAGGATCCGGACCACTACGCCAACCGCTATGCCCATTGCGACGTGCTGGTCGCGGGCGCCGGTGTGGCCGGTCTTTCCGCCGCGCTTGCCGCCGCCGAGGCCGGTGCACGCGTCATCCTCGTCGACGAACAGCCGGAAGTGGGCGGTGCGCTGCATTACGACACGTCGGTGAAGATCGACGGCCAGAACGGCTACGACTGGGCGCAGGCGACGGCCGCCAAGCTCAAGGCGATGGAGAACGTCACCGTCCTCACCCGCACGACGGCCTTCGGCTACTACAACCACAATTTCGTCGGCCTCGTCGAGCGCGTCACCGACCACCTCGCAAAGCCTGACAAGAAGCTGCCGCGTGAGCGGATGTGGCAGGTGCGCACCAAGCGCGTCATCCTCGCCACCGGCTCCATCGAGCGCCACATGGTGTTCGCCAACAACGACCGGCCGGGCATCATGCTCGCTTCGGCGGCGCGCACCTATCTCAACCATTTCGGCGTCGCGGTCGGTCGCAAGGTCGGCGTCTACACGGCGAACGATTCGGCCTATGAAGCCGCCTTCGACCTGAAGCGTGCCGGCGTCACCGTCGCCGCCATCGTCGATGTCAGGGAAAAGCCCGGCGAGGCGGTGCTGACTGAAGCCCGCAGGCTCGGCATCGAGGTGCTGGCAGGCCATTCGGTGGTCGATACCAAGGGCAAGCTTCGCATCTCCTCCATGTCGGTCGCCCGCAACGGCGGCGGCTCGGCGCGGTCCATCCCGGTCGATGCGCTGCTGATGTCGGCCGGCTGGACGCCTTCCGTCCACCTCTTCTCGCAGTCGCGCGGCAAGGTGGCCTATGACGCGGCCACCGGCCGCTTCCTGCCGGGCACCTATGCGCAGGATTGCCTTTCGGTCGGCTCGTGCAACGGCACGGACGGCCTGCAGGCGACGATCGAAGAATCGCTTGCGGCGGGCGAGCTGATGGCGCGCGCCACCGGCAACGAGGGCGGCGGCAAGGTCGAGCTTTCCGGCGAGAATGCCTTTGAATGGACCGGCGGCATGGCAGGCAGCGGCGAGGGCGCCGGCGTCGACACGACCGTCAAGGCCTTCGTCGACTTCCAGAACGATGTCTGCGCCAAGGACATCCGCCTCGCCGTGCGCGAGGGCATGCACTCGATCGAGCACATCAAGCGCTTCACCACCAACGGCATGGCGACGGACCAGGGCAAGCTGTCCAACATCCACGGCCTTGCCATCGCCTCGGAAGTCTTGAACCGCGAGATCCCGAAGATCGGCCTCACGACCTTCCGCGCGCCCTACACGCCCGTCACCTTCGGCGCGCTGATCAGCCATTCGCGCGGCGATCTCTTCGACCCGACGCGCAAGACGCCGATGCACGACTGGGAAGTGGCGCATGGCGCGGTCTTCGAGGACGTCGGCAACTGGAAGCGCGCCTGGTACTATCCGCGCTCCGGCGAGACCATGCACGATGCGGTCAACCGCGAGTGCCGCACGGTGCGTAACGTCGCCGGCCTGTTCGATGCCTCGACGCTCGGCAAGATCGAGGTCGTCGGCCCGGATGCGGGCGCGTTCATGAACCTCATGTACACCAACGCCTGGGATACGCTGAAGCCCGGCCGCTGCCGCTACGGCATCATGCTGCGCGAGGACGGCTTCGTCTATGACGACGGCGTCGTCGGGCGCCTGGCGGAGGATCGCTTCCACGTCACCACCACGACGGGCGGCGCGCCGCGCGTCATGCACCACATGGAGGACTATCTCCAGACGGAGTTCCCGCATCTCAAGGTCTGGCTGACCTCGACCACCGAACAGTGGGCGGTCATCGCCGTTCAGGGGCCGAAGGCGCGCGAGATCCTCGAACCGCTGGTCGAGGGCATCGACATCTCGAACGAGGCGTTCCCGCATATGAGCGTTCGCGAGGGCAAGATCTGCGGCGTGCCGACCCGGCTCTTCCGCATGTCCTTCACGGGTGAGGCGGGCTACGAAGTCACCGTCCCCGCCGATTACGGCCAGGCCGTCTGGGAAGCCATCTGGGCGCGGGCCGAACCGCTCGGCGCCTGCGCCTACGGCACGGAGACGATGCACGTCCTTCGCGCCGAGAAGGGTTACATCATCGTCGGCCAGGACACGGACGGCACGGTCACGCCGCACGATGCGAGCCTGAGCTGGGCCGTCTCGAAGAAGAAGACGGACTTCGTCGGCATCCGTGGCCTCAAGCGGCCGGACCTCGTCAAGGAGGGCCGCAAGCAGCTTGTCGGCCTCCTGACGAAGGATCCGAACGTGGTGCTGGAGGAGGGCGCGCAGATCGTCGCCGATCCGAACCAGCCGAAGCCGATGACCATGCTCGGCCATGTCACGTCGTCCTACTGGTCGGAAAACTGCGGCCGGTCGATCGCCATGGCGCTGGTTGCCGGCGGCCAGGCCCGCATGGGCCAGACGCTCTACGTGCCGATGCCGGACCGCACCATCGCGGTCGAGGTCAGCGACATGGTGTTTATCGACAAGGATGGAGGACGCCTCAATGGCTGA
PROTEIN sequence
Length: 965
DTVASALLANGVHLVCRSFKYHRPRGILSAGAEEPNALVDVSRDAARRQPNVRAPVQEVFDGMKVESQNRWPSLAFDIGGVNNLMSPFFAAGFYYKTFMWPKVAWEKVYEPFIRKAAGLGVAPTEEDPDHYANRYAHCDVLVAGAGVAGLSAALAAAEAGARVILVDEQPEVGGALHYDTSVKIDGQNGYDWAQATAAKLKAMENVTVLTRTTAFGYYNHNFVGLVERVTDHLAKPDKKLPRERMWQVRTKRVILATGSIERHMVFANNDRPGIMLASAARTYLNHFGVAVGRKVGVYTANDSAYEAAFDLKRAGVTVAAIVDVREKPGEAVLTEARRLGIEVLAGHSVVDTKGKLRISSMSVARNGGGSARSIPVDALLMSAGWTPSVHLFSQSRGKVAYDAATGRFLPGTYAQDCLSVGSCNGTDGLQATIEESLAAGELMARATGNEGGGKVELSGENAFEWTGGMAGSGEGAGVDTTVKAFVDFQNDVCAKDIRLAVREGMHSIEHIKRFTTNGMATDQGKLSNIHGLAIASEVLNREIPKIGLTTFRAPYTPVTFGALISHSRGDLFDPTRKTPMHDWEVAHGAVFEDVGNWKRAWYYPRSGETMHDAVNRECRTVRNVAGLFDASTLGKIEVVGPDAGAFMNLMYTNAWDTLKPGRCRYGIMLREDGFVYDDGVVGRLAEDRFHVTTTTGGAPRVMHHMEDYLQTEFPHLKVWLTSTTEQWAVIAVQGPKAREILEPLVEGIDISNEAFPHMSVREGKICGVPTRLFRMSFTGEAGYEVTVPADYGQAVWEAIWARAEPLGACAYGTETMHVLRAEKGYIIVGQDTDGTVTPHDASLSWAVSKKKTDFVGIRGLKRPDLVKEGRKQLVGLLTKDPNVVLEEGAQIVADPNQPKPMTMLGHVTSSYWSENCGRSIAMALVAGGQARMGQTLYVPMPDRTIAVEVSDMVFIDKDGGRLNG*