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SCNpilot_expt_1000_bf_scaffold_18604_5

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 3196..4143

Top 3 Functional Annotations

Value Algorithm Source
Putative secreted protein n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PHA4_RHIML similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 315.0
  • Bit_score: 581
  • Evalue 4.20e-163
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 315.0
  • Bit_score: 581
  • Evalue 1.30e-163
  • rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJF70844.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 315.0
  • Bit_score: 566
  • Evalue 2.00e-158

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Taxonomy

Agrobacterium arsenijevicii → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGAAACTGAACCGAATGCTGATGGGCGCTGCCCTCTTGTCGCTTGCGGCCGGCGGTGCCGCGCAGGCACAGAGCCAGCAGGACCTGATCAAGCCGATCGACAAGGAACTGACCTTCGTCTACATCCCGAAGGTCATCCATCCCTGGTACGACGTCGTGGCCGAAGGCGCGAAGTTCGCCGCCGAAGAGCTTGCCAAGTCCGGCATCAAGGTCAACGTCATCTGGGACCAGCCGCCGCAGGCGGACGTGGCGGACCAGAACCAGCGCATCGAGACCAATATCGGCCGCAAGCCCGACGGCCTGGCCGTCGCCTGCCTCGACCAGGCGACGAACGTGCAGCTCCTCGGCGAAGCGCGCAAGGCCGGCGTCAACGTCATCACCTTCAACTCGTTCTGCGACGACGCCTTCCCCTTCGTGGGCCCGAAGAGCAGCTACCAGGACGGCTTCGATCTCGGCGAGTTCCTCGCCAAGACGCTCGACGGCAAGGGCAAGATCGGCATCCTCGCCGGCAGCCTGACGGCCTCCGACCACGTCCAGCGCATCGAGGGCTTCAAGAAGGCGCTGGAAAGCCATCCGGACATGCAGATCGTCTTCGAGCAGCCCGACAACGACGTGCTGGAGGATGCCGTCACGCTGACGGAGAACGCATTGCAGGCCAATCCCGACATCGCCGGCATCTTCGGCTCGAACGCCTCCAACCCGATCGGCGCGGCCCGTGCCGTGAAGAATGCCGGGCTGGCCGGCAAGGTTGCCATCGTCGGCATGGACGACCTGCCGGAAGCCGTCGATGCGGTATGCGACGGGACGATCACCGCCCTCAAGGCCCAGCGCCAGTGGGACATGGGCTACTGGACGGTGAAGTATCTCGTGGCGATGAACGAGAACCACACCTATCCGATGTTCCACGACACCGGCTCGCGCTTCATCACGAAGGACGACTGCAAGTAA
PROTEIN sequence
Length: 316
MKLNRMLMGAALLSLAAGGAAQAQSQQDLIKPIDKELTFVYIPKVIHPWYDVVAEGAKFAAEELAKSGIKVNVIWDQPPQADVADQNQRIETNIGRKPDGLAVACLDQATNVQLLGEARKAGVNVITFNSFCDDAFPFVGPKSSYQDGFDLGEFLAKTLDGKGKIGILAGSLTASDHVQRIEGFKKALESHPDMQIVFEQPDNDVLEDAVTLTENALQANPDIAGIFGSNASNPIGAARAVKNAGLAGKVAIVGMDDLPEAVDAVCDGTITALKAQRQWDMGYWTVKYLVAMNENHTYPMFHDTGSRFITKDDCK*