ggKbase home page

SCNpilot_expt_1000_bf_scaffold_20659_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 486..1430

Top 3 Functional Annotations

Value Algorithm Source
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 314.0
  • Bit_score: 607
  • Evalue 1.30e-170
eryB; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 312.0
  • Bit_score: 578
  • Evalue 1.10e-162
Glycerol-3-phosphate dehydrogenase GlpD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C666_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 314.0
  • Bit_score: 607
  • Evalue 9.30e-171

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
GTGGAGACGAAGAACCGCGTGACGGGCGAGACCCGCGCCTTCCGCGCGAAATGCGTCGTCAACTGCGCCGGCCCGTGGGTGTCCGACGTCATCAACCGCGTCGCCGGCTCCAACTCCACGCGCAATGTCCGCCTCGTCAAGGGCAGCCACATCATCGTGCCGAAGTTCTGGTCGGGGGCGAACGCCTATCTGGTGCAGAACCACGACAAGCGCGTCATCTTCATCAACCCCTACGAGGGCGACAAGGCGCTGATCGGCACCACCGACATCGCCTATGAGGGCCGCGCCGAGGACGTTTCGGCCGACGAGGCCGAGATCGACTACCTGTTGAAGGCCGTGAACCGCTACTTCAAGGAGAAGCTGCGCCGGCAGGACGTGCTGCATTCCTTCTCCGGGGTGCGCCCGCTCTTCGACGACGGCAAGGGCAATCCCTCCGCCGTCACCCGCGACTATGTCTTCGACCTCGACGAGACGGGCGGCGCGCCGCTGCTCAACGTCTTCGGCGGCAAGATCACCACCTTCCGCGAGCTCGCCGAGCGCGGCATGCATCGCCTCGGGCACATCTTCCCCAAAATGGGCGGCGACTGGACGGAGAAGGCCCCGCTGCCCGGCGGCGACATGCCGAACGCCGACTACGAGACCTTCGCCAACGGCCTGCGCGATGCCTATCCGTGGATGCCGCGCAAGCTGGTGCACCATTACGGCCGCCTCTACGGCACGCGCACCAAGGCCGTCGTCGGCGGCGCGACCGGCCTCGAAGGGCTCGGCCGGCATTTCGGTGGCCAGTTCTACGAGGCGGAAGCCCGCTATCTCGTCGCCACCGAATGGGCGCAGACGGTGGAGGACATCCTCTACCGCCGCACCAAGCACTACCTGCACCTGACGGAAGCCGAGCGCGCGGCCTTTGCCGACTGGTTCGACGCCGCCCGCCCTGCCGCCGCCTGA
PROTEIN sequence
Length: 315
VETKNRVTGETRAFRAKCVVNCAGPWVSDVINRVAGSNSTRNVRLVKGSHIIVPKFWSGANAYLVQNHDKRVIFINPYEGDKALIGTTDIAYEGRAEDVSADEAEIDYLLKAVNRYFKEKLRRQDVLHSFSGVRPLFDDGKGNPSAVTRDYVFDLDETGGAPLLNVFGGKITTFRELAERGMHRLGHIFPKMGGDWTEKAPLPGGDMPNADYETFANGLRDAYPWMPRKLVHHYGRLYGTRTKAVVGGATGLEGLGRHFGGQFYEAEARYLVATEWAQTVEDILYRRTKHYLHLTEAERAAFADWFDAARPAAA*