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SCNpilot_expt_1000_bf_scaffold_20669_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 276..1694

Top 3 Functional Annotations

Value Algorithm Source
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase {ECO:0000313|EMBL:EYR82273.1}; EC=4.1.1.n1 {ECO:0000313|EMBL:EYR82273.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 472.0
  • Bit_score: 961
  • Evalue 5.40e-277
urate catabolism protein (EC:3.5.1.41) similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 471.0
  • Bit_score: 770
  • Evalue 3.00e-220
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZY9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 472.0
  • Bit_score: 961
  • Evalue 3.80e-277
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGCGATATTGCCGTGACATGCACGGATATGGACAGACACCGCCGGCTGCCGGGTGGCCGGACGAGGCACACGTCGCCGTACAGTTCGTGCTGAACTACGAAGAAGGCGGCGAGAATTGTGTGTTGCACGGCGATGCGGCATCCGAAGCCTTTCTCTCCGAGATCGTCGGCGCCGCCCAATGGCCGGGCCAGCGCCACTGGAACATGGAATCGATCTACGAATACGGCGCGCGCGCCGGCTTCTGGCGCCTGCACCGGCTGCTGACGGAAAAGAACGTGCCCGTCACCGTCTACGGCGTCGCCACCGCGCTCCGCCGCTCGCCCGCCCAGGTGGCCGCCATGCAGGAGGCCGGCTGGGAAATCGCCTCGCACGGCCTCAAATGGGTCGAGCACAAGGACATGACGGTGGAGGACGAACGCGCGGCCATTGCCGAGGCAATCCGCCTGCACACGCTCGTCACCGGCGAACGGCCGCGCGGCTGGTATACCGGCCGCTGTTCGGTCAACACCGTCGATCTCGTCACCGAAGCCGGCGGCTTCGACTATGTTTCCGATACCTATTCCGACGACCTGCCCTACTGGCACGAGCATGGCGGCCGGCAGCAGCTGATCATCCCCTACACGCTCGACGCCAACGACATGCGCTTCGCAACGCCCCAGGGCTTCAACAGCGGCGACCAGTTCTTCAGCTACCTGAAGGATAGTTTCGACGCGCTCTATGCGGAAGGCGCCAAGGGCAGCCCGAAGATGATGAGCATCGGCCTGCACTGCCGCCTGATCGGCCGGCCGGGCCGCGTCATGGCGCTCGCCCGCTTCATCGACTATGTGCAGAGCCACGAAAAAGTCTGGATCGCCCGCCGCGTCGACATCGCCGAGCACTGGGCAAAAACCCATCCGCCAAAGCCGGTCGCAGAGCGCCCGTCGCAGATGGCGGAAGAGGCGTTCGTCAAACGCTTCGGCGATATCTTCGAGCACTCCCCCTGGATCGCCCGGCGCGCCTTCGCCGACGAACTTTCGCCGGCGAACGATACCGCGATCGGCCTTTCTGCCGCGCTCACCTTCCAGTTCCGTGCGGCGAGCGAGGAGGAGCGTCTGGGCGTTCTTGTCGCCCACCCGGATCTCGCCGGCAAGCTGGCCGTGGCCAAGCGCCTGACGGCAAGCTCGACGGAAGAGCAGGCGTCGGCCGGTCTCGACGCGCTGACCGACGAGGAGCGCGCACGCTTCACCGAGCTCAACAACCGCTATGTCGAAAAATTCGGCTTCCCGTTCATCATCGCCGTGCGCGACAACACCAAGGCGAGCATTCTCGCCGCCTTCGAAAAACGCATCGCGAACGACCGCGTCGCCGAATTCGCCACCGCCTGCAAGCAGGTCGAGCGAATCGGCTATCTGCGGCTCAATGCGCTGCTGCCGGCCTGA
PROTEIN sequence
Length: 473
MRYCRDMHGYGQTPPAAGWPDEAHVAVQFVLNYEEGGENCVLHGDAASEAFLSEIVGAAQWPGQRHWNMESIYEYGARAGFWRLHRLLTEKNVPVTVYGVATALRRSPAQVAAMQEAGWEIASHGLKWVEHKDMTVEDERAAIAEAIRLHTLVTGERPRGWYTGRCSVNTVDLVTEAGGFDYVSDTYSDDLPYWHEHGGRQQLIIPYTLDANDMRFATPQGFNSGDQFFSYLKDSFDALYAEGAKGSPKMMSIGLHCRLIGRPGRVMALARFIDYVQSHEKVWIARRVDIAEHWAKTHPPKPVAERPSQMAEEAFVKRFGDIFEHSPWIARRAFADELSPANDTAIGLSAALTFQFRAASEEERLGVLVAHPDLAGKLAVAKRLTASSTEEQASAGLDALTDEERARFTELNNRYVEKFGFPFIIAVRDNTKASILAAFEKRIANDRVAEFATACKQVERIGYLRLNALLPA*