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SCNpilot_expt_1000_bf_scaffold_22895_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(717..1835)

Top 3 Functional Annotations

Value Algorithm Source
Fosmidomycin resistance protein Fsr n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJE8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 370.0
  • Bit_score: 693
  • Evalue 1.50e-196
  • rbh
Fosmidomycin resistance protein Fsr {ECO:0000313|EMBL:EYR78460.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 370.0
  • Bit_score: 693
  • Evalue 2.10e-196
major facilitator superfamily protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 369.0
  • Bit_score: 604
  • Evalue 2.90e-170

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGCTGAACGACATCATGCAGTCGCTGCTGACGTCGCTCTATCCGCTCCTCAAGGAGAACTATGCGCTCGACTTCGTGCAGATCGGCCTTTTGACCATGGCGTTCCAGGTGACGGCCTCGCTGCTGCAGCCGGCCGTCGGCATCGTGACGGACCGCTGGCCGATGCCCTTCTCGCTGCCGGTCGGCATGGGCAGCACCTTCGTCGGGCTGATCATGCTCGCCTATGCGCATTCCTTCCCGGTGCTTGTCCTAGGTGCCTGCCTGATCGGCCTCGGCTCGGCGATCTTCCACCCGGAATCCTCGCGCGTCGCGCGCCTCGCCTCCGGCGGGCGGCACGGCCTGGCACAGTCGATGTTCCAGGTCGGCGGCAATGCCGGCACGGCGCTCGGCCCGCTGCTGGCCGCCTTCATCGTGCTGCCCTTCGGCCAGTCGAGCGTCGCCTGGTTCTCGGCCGTCGCCCTTCTCGGCATGGTCATCCTCACCTGGGTCGGCAACTGGTATGCCGGCGAGCGCCGCCTTGCGGCCGGCCGCCCGGCCGCCAGCCGCACGCTGCCGCTGCCGCGCGGCAGGGTCGCCTGGGCGCTGGCCGTCCTCGTCCTCCTGACGACGACGAAGAACGCCTATCTCGCCAGCATATCGAGCTACTTCACCTTCTATACGATCGACCGCTTCGGCCTCGACGTGCAGCAGGCGCAGCTCATGCTGTTCCTCTTCCTCGGCGCTTCCGCGCTCGGCGTCTTCATGGGCGGCCCGATCGGCGACCGGCTCGGCACGCGCTTCGTCATCTGGTTCTCGATCCTCGGCGTCATCCCCTTCGCGCTGATGCTGCCCTATGCGAACCTCTTCTGGACGGGTGTGCTGACGGTGCTGATCGGCCTGATCTTCTCGTCGGCCTTCTCCGCCATCGTCGTCTTCGCGCAGGAACTGATACCGGGCCGCGTCGGCATGATCGCCGGTATATTCTTCGGCTTCGCCTTCGGCGCGGGCGGCCTCGGCGCGGCCCTGCTCGGCGGCGTCGCCGACAGCCACGGCATCGAGTTCGTCTACAAGATCTGCTCCTACATGCCGCTCCTCGGCATCCTCACCATCTTCCTGCCGCGCCTGCCGGCAAAGCACTGA
PROTEIN sequence
Length: 373
MLNDIMQSLLTSLYPLLKENYALDFVQIGLLTMAFQVTASLLQPAVGIVTDRWPMPFSLPVGMGSTFVGLIMLAYAHSFPVLVLGACLIGLGSAIFHPESSRVARLASGGRHGLAQSMFQVGGNAGTALGPLLAAFIVLPFGQSSVAWFSAVALLGMVILTWVGNWYAGERRLAAGRPAASRTLPLPRGRVAWALAVLVLLTTTKNAYLASISSYFTFYTIDRFGLDVQQAQLMLFLFLGASALGVFMGGPIGDRLGTRFVIWFSILGVIPFALMLPYANLFWTGVLTVLIGLIFSSAFSAIVVFAQELIPGRVGMIAGIFFGFAFGAGGLGAALLGGVADSHGIEFVYKICSYMPLLGILTIFLPRLPAKH*