ggKbase home page

SCNpilot_expt_1000_bf_scaffold_25194_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(279..1064)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAB4_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 247.0
  • Bit_score: 143
  • Evalue 3.20e-31
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 254.0
  • Bit_score: 213
  • Evalue 4.60e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rhodospirillales_65_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGTCGAAGTTGCGGGCTTCGACCTTCTTCTGCGCGCGCTCCAGCGCCTTGTTGATCCAGGGATGGACGATGGCCCATGCGCTCGGAGCCGAAGATGCGCATCAGGTCGTCCTGCAGCGACAGGAAGAACTTCGAGCGGCCCGGGTCGCCCTGGCGGCCCGAACGGCCGCGAAGCTGGTTGTCGATGCGGCGGCTTTCATGGCGCTCGGTGGCAAGCACGTAGAGGCCGCCGGCGGCGAGCGCCTTCTCCTTGAGCTGCCTGACCTCGGCGACGATCGCTTCGCGCTTGGCATCGCGCTCGGGACCCGGTTCCATTTCGGCGAGCTCGCGCTCCAGCCGCATGTCGACATTGCCGCCGAGCTGGATGTCGGTGCCGCGGCCGGCCATGTTGGTGGCGATGGTGACCGCACCCGGTACGCCTGCCTGCGAGACGATATAGGCTTCCTGCTCGTGGTAGCGGGCGTTGAGGACCTGGAAATCCTTGAAGCCGGACTTCTTGAGCAGTTCGGCCAGAAGCTCGGACTTCTCGATCGAGGTCGTGCCGACGAGGACAGGCTGGCCCTTCTCGCGGGACGCCTTGATCTCCTCGATGATCGCCTTGTACTTCTCTTCCGCCGTCCGGTAGACCTCGTCGTCCTCGTCGAGGCGCTGGATCGGCAGGTTGGTCGGCACTTCCACGACCTCGAGGCCGTAGATGTTGCCGAATTCCTCGGCTTCCGTCGAGGCCGTGCCCGTCATGCCGCCGAGCTTGGAGTACATGCGGAAATAGTTCTGGAAGGTGATTGA
PROTEIN sequence
Length: 262
MSKLRASTFFCARSSALLIQGWTMAHALGAEDAHQVVLQRQEELRAARVALAARTAAKLVVDAAAFMALGGKHVEAAGGERLLLELPDLGDDRFALGIALGTRFHFGELALQPHVDIAAELDVGAAAGHVGGDGDRTRYACLRDDIGFLLVVAGVEDLEILEAGLLEQFGQKLGLLDRGRADEDRLALLAGRLDLLDDRLVLLFRRPVDLVVLVEALDRQVGRHFHDLEAVDVAEFLGFRRGRARHAAELGVHAEIVLEGD*