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SCNpilot_expt_1000_bf_scaffold_25194_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 1093..1875

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit SecA n=1 Tax=Hoeflea sp. 108 RepID=UPI00036ECFAD similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 258.0
  • Bit_score: 404
  • Evalue 9.90e-110
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 262.0
  • Bit_score: 483
  • Evalue 2.40e-133
azi, div; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 263.0
  • Bit_score: 399
  • Evalue 1.00e-108

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
GTGCTCAACGACCAGCGCAAGGTCATCTTCGAGCAGCGCATCGAGCTGATGGACGGCGACAACCTCTCCGAGATCGTCGGCGACATGCGCCAGGAAGTGGTCGAAAACCTCGTGCGCCTGCACATCCCGGAAAATGCCTATGCGGAGCAGTGGGATGTCGCGGGCCTCAAGCAGGGCGTTCTCGACCAGCTCAATCTCGACCTGCCGATCGAGGCCTGGGCGGCCGAGGAAGGCATCGACGAGAAGGACATCCTGGAGCGGCTGAAGGCGGCGGCCGACGAGGCCGCGCGCGATCGCGCGGAACGCTTCGGTCCCGAGATCATGGCCTATGTCGAGCGCTCGGTCCTGCTCCAGACGCTGGACCATCTGTGGCGCGAGCACATCGTCAACCTCGACCACCTGCGCTCGGTCATCGGCTTCCGCGGCTATGCCCAGCGCGATCCGCTGCAGGAATACAAGGCCGAGGCCTTCGAGCTGTTCCAGGCGCTGCTGGCGAACCTGCGCCAGACCGTCACCGCGCAGCTCATGCGCGTCGAGCTGGTGCGCCAGGCCGCCGATGCCCCGGTGCCGGCGCCGCCGGCCATGGAAGGCCATCATATCGACGGGACCACCGGCGAGGACGATTTCGGCGAGGGCAACGGTTTCGCGGCCACGGCCGTCGAGCCGGAAGACCGCGACCCGAACGATCCTGCGACCTGGGGCCGCGTTGCGCGCAACGAGCCGTGCCCCTGCGGTTCGGGCAAGAAATACAAGCATTGCCACGGCGCCTTCGAGCAGGTCTAG
PROTEIN sequence
Length: 261
VLNDQRKVIFEQRIELMDGDNLSEIVGDMRQEVVENLVRLHIPENAYAEQWDVAGLKQGVLDQLNLDLPIEAWAAEEGIDEKDILERLKAAADEAARDRAERFGPEIMAYVERSVLLQTLDHLWREHIVNLDHLRSVIGFRGYAQRDPLQEYKAEAFELFQALLANLRQTVTAQLMRVELVRQAADAPVPAPPAMEGHHIDGTTGEDDFGEGNGFAATAVEPEDRDPNDPATWGRVARNEPCPCGSGKKYKHCHGAFEQV*