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SCNpilot_expt_1000_bf_scaffold_24064_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 284..652

Top 3 Functional Annotations

Value Algorithm Source
Glutathione S-transferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CN67_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 102.0
  • Bit_score: 183
  • Evalue 1.70e-43
Glutathione S-transferase {ECO:0000313|EMBL:EYR80127.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 102.0
  • Bit_score: 183
  • Evalue 2.40e-43
glutathione S-transferase family protein similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 102.0
  • Bit_score: 176
  • Evalue 6.50e-42

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGGCAGACCTGTCGTCCTTCCCCATCACCAAGAAGTGGCCCGCAAGGAACCCCGACATCATCCTGCTCTATTCGCTGCAGACGCCGAACGGCGTGGAGGTGTCGATCGCGCTGGAGGAACTCGGCCTTGCCTATGAGCCGCACCGCATCGAGTTCGGGCCGGAGGGCGTGAAGTCGCCGGAATTCGTGTCGCTCAACCCGAACGGCCGCATCTCCGCGATCATCGATCCGGACGGGCCGGGCGGCAAGCCGATCGGCCTCTTCGAATCCGGCGCGATCCTCGTCTATCTCGCGGAAAAGACGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCTGCCCGTTACGAGACCCTGTGCTGGGTGA
PROTEIN sequence
Length: 123
MADLSSFPITKKWPARNPDIILLYSLQTPNGVEVSIALEELGLAYEPHRIEFGPEGVKSPEFVSLNPNGRISAIIDPDGPGGKPIGLFESGAILVYLAEKTGXXXXXXXXXXPLPVTRPCAG*