ggKbase home page

SCNpilot_expt_1000_bf_scaffold_24064_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 1142..2359

Top 3 Functional Annotations

Value Algorithm Source
ferredoxin--NAD(+) reductase (EC:1.18.1.3) similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 405.0
  • Bit_score: 610
  • Evalue 3.40e-172
  • rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Rhizobium meliloti RepID=UPI000368CCE0 similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 403.0
  • Bit_score: 612
  • Evalue 2.90e-172
  • rbh
NAD(P)H-nitrite reductase {ECO:0000313|EMBL:EYR80128.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 405.0
  • Bit_score: 747
  • Evalue 8.00e-213

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
GTGACGGGAAGACTGGTTGTTGTGGGCGGCGGTCAGGCCGCGTTTGCGCTCGTTGCCAAGCTGCGCGCGCTGAAGGACGAGCGGCCGATCACCATCCTCGCCGCCGAGGCGAGCCATCCCTACCAGCGCCCGCCGCTTTCCAAGAAATACCTGCTCGGCGAGGCCGACCTTTCCCGCCTGATGTTCCGGCCGGAGAACTGGTACGCTGAAAACAACGTCGACATCCGCCTGTCGACCGAGGTCACCGCGATCGACCGCGCGGCAAAGACGGTGAGCCTCGGCGACGGCTCCACCCTGCATTACGGCGTCCTGGCGCTCGCCACGGGCGCGACGCCCCGCCGCCTGCCGGCCGAGATCGGCGGCGACCTGGAGGGCGTCTTCACGGTGCGCGACTACCGCGATGCCGACCGCCTCGGCCTCGAAATGCAGGAGGGCCGCCGGGCGCTCGTCGTCGGCGGCGGCTATATCGGCCTCGAGGCCGCGGCCGTCGCGCGGGGCAGGGGGCTGCATGTCACCGTCATCGAGATGGCCGACCGCATCCTTGCCCGCGTCGCCTCGCCCGCCACGGCGACGATCCTCAAGGCCATCCACACCGCGCGCGGCGTCGACGTGCGCGAGAAGACCGGCCTCGTCCGCCTCCTCGGCGAGAACGGCCGCGTGACCGGGGCGGAGCTCTCCGACGGCTTCGTGCTGCCGGTGGACGTGGTGATTGCTGGCATCGGCGTCGCCGCGAACGACCGGCTCGCCCGCGATGCCGGGCTGGAGGTTGCGAACGGCATCGTCGTCGATGCCCATGCCCGAACCTCCGATCCGTCCATCTTCGCGATGGGCGACTGCGCCGTGCTTCCCTTCGACGGCAACCGCGTGCGGCTCGAATCCGTGCAGAACGCCGTTGACCAGGCGGAAGCGGCCGCCGCGGTCATCGCCGGCGGCGATGCGCCCTACGTGCCGAAACCCTGGTTCTGGTCCGACCAGTATGACGTCAAGCTGCAGATCGCCGGCTTCTGCCTGGGCTTCGACGACACATTCGTGCGCCCCGGCCAGCGCGAGGGAGCCGTCTCGGTCTGGTATTTCCGGGGAGGAAAGCTGATCGCCGTCGATGCCGTCAACGACGCCAAGGCCTATGTCGTCGGCAAGAAGCTGATCGAGATGGGCCGCACGCCCGACCGCACAGCCCTCGAAGACCCGGCGACGGACCTCAAGGCGCTGACGCTCTGA
PROTEIN sequence
Length: 406
VTGRLVVVGGGQAAFALVAKLRALKDERPITILAAEASHPYQRPPLSKKYLLGEADLSRLMFRPENWYAENNVDIRLSTEVTAIDRAAKTVSLGDGSTLHYGVLALATGATPRRLPAEIGGDLEGVFTVRDYRDADRLGLEMQEGRRALVVGGGYIGLEAAAVARGRGLHVTVIEMADRILARVASPATATILKAIHTARGVDVREKTGLVRLLGENGRVTGAELSDGFVLPVDVVIAGIGVAANDRLARDAGLEVANGIVVDAHARTSDPSIFAMGDCAVLPFDGNRVRLESVQNAVDQAEAAAAVIAGGDAPYVPKPWFWSDQYDVKLQIAGFCLGFDDTFVRPGQREGAVSVWYFRGGKLIAVDAVNDAKAYVVGKKLIEMGRTPDRTALEDPATDLKALTL*