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SCNpilot_expt_1000_bf_scaffold_26198_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 777..1694

Top 3 Functional Annotations

Value Algorithm Source
Exopolysaccharide production negative regulator n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MBS8_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 269.0
  • Bit_score: 399
  • Evalue 3.80e-108
  • rbh
Exopolysaccharide production negative regulator {ECO:0000313|EMBL:EYR82395.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 298.0
  • Bit_score: 540
  • Evalue 1.50e-150
exoR; exopolysaccharide production negative regulator precursor; K07126 similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 269.0
  • Bit_score: 399
  • Evalue 1.20e-108
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGAGCCAGCCGATGTCATTGTCGCCGGAAATGCCGGAAACCTGCACGAAGCCCGTGCATGTCCGGTTCGGCACAGGCAGGAAGCCTTGGCGCGGAATTGTAAAAGTGATGCCCAAGTCCGAGTTGTTGCCGATGAAAGTAGTGGTAATGGGCCTTTGCCTTTCGCTGTCCTCCTGGATGGCGCCGCAGGCTCTCGCATTCGATCCCCAGGCCGGCGTCAGCAAGGAAAGCGGCCCCTTCGACCTCTTCAAGTTCGGTTTCTTCTCCTACAAGGAAGGCCGCAAGAGCGATGCCGTCGAGGCCTACCGCTATGCGGCGGAAAAGGGCCATACCGGTTCGCGCTGGGCGCTCGCCAACATGTATGCCGACGGCGACGGCGTGCCGGAAAACGACCTCGAAGCCTTCAAGATCTACAGCGAGATCGCCCAGGCCGGCGTCGAGCCCGGCTCGGAGGACACGGGTTACTTCGCCAATGCGCTGATCGCGCTTGCCAGCTACTACCGCCGCGGCATTCCCGACAGTCCGGTGAAGATCGACCTTTCGCAGGCGCGCCAGCTCTATTTCCAGGCGGCGTCCGCATTCGGGATCCCCGAAGCGCAGTTCCAGCTCGGTCGCATGATGCTGACGGGCGAGGGCGGTTCTGTCAGCGTGCACCAGGCCAAGAAGTGGCTGAACCGCGCCCGCAACAACGGCCATGCCGGCGCCATGGGGCTGTTCGGCAACATCCTCTTCCAGGAAGGCGACACGACGCGGGGCCTTGCGATGATGACGGCCGCGCTCGATCATTGCCCGCCGAAGGACTGTGCCTGGCTCCAGGCAACGCAGGAAGAAGCCTTCTCCGTCGCCAGCGAGGAGGACCGCCGCAAGGGCGTCGCGCTCGCACAGAGCATCCGCCACCCCGCTGCGCGGCAGAGCTAG
PROTEIN sequence
Length: 306
MSQPMSLSPEMPETCTKPVHVRFGTGRKPWRGIVKVMPKSELLPMKVVVMGLCLSLSSWMAPQALAFDPQAGVSKESGPFDLFKFGFFSYKEGRKSDAVEAYRYAAEKGHTGSRWALANMYADGDGVPENDLEAFKIYSEIAQAGVEPGSEDTGYFANALIALASYYRRGIPDSPVKIDLSQARQLYFQAASAFGIPEAQFQLGRMMLTGEGGSVSVHQAKKWLNRARNNGHAGAMGLFGNILFQEGDTTRGLAMMTAALDHCPPKDCAWLQATQEEAFSVASEEDRRKGVALAQSIRHPAARQS*