ggKbase home page

SCNpilot_expt_1000_bf_scaffold_27658_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 1107..1595

Top 3 Functional Annotations

Value Algorithm Source
Thiamine-phosphate pyrophosphorylase ThiE {ECO:0000313|EMBL:EYR79483.1}; EC=2.5.1.3 {ECO:0000313|EMBL:EYR79483.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 328
  • Evalue 6.10e-87
thiEch; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 163.0
  • Bit_score: 261
  • Evalue 2.00e-67
Thiamine-phosphate pyrophosphorylase ThiE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVZ6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 328
  • Evalue 4.30e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGTCCGATGCCGAACCCCGCTGCCGTCTGGTGCTGATCCTCCCCGAGGGCGAGGACCTTGCCGCCCGCGCCGCGATGCTGGAGGGCGCACTGAAGGGCGGCGACGTTGCCTCGGTGATCCTGCCGCAATACGGGCTGGACGACGGCCAGTTCCAGAAACATGCTGAAACCCTGGTTCCAATCATCCAGCAGGCAGGCGCTGCAGCGCTCGTTGCCGGCGATACCCGCGTTGCTGGCCGCGCGAAAGCCGACGGCATTCACATCACCGGCGGGCTCGAGGCGCTCGGCGAGGCCGTCGAGAAGTTCACGCCGAAACTTATCGTCGGCGGCGGCAACGCGACCGACCGGCACAAGGCACTCGAGATCGGCGAGGTGCAGCCCGACTACATCTTCTTCGGCAAGATCGGCGGCGACATCAAGCCGGAGGCGCACCCGAAGAACCTTGCGCTTGCCGAATGGTGGGCCTCGATGGTGGAGATTCCCTGCATC
PROTEIN sequence
Length: 163
MSDAEPRCRLVLILPEGEDLAARAAMLEGALKGGDVASVILPQYGLDDGQFQKHAETLVPIIQQAGAAALVAGDTRVAGRAKADGIHITGGLEALGEAVEKFTPKLIVGGGNATDRHKALEIGEVQPDYIFFGKIGGDIKPEAHPKNLALAEWWASMVEIPCI