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SCNpilot_expt_1000_bf_scaffold_28944_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 3..158

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SL52_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 51.0
  • Bit_score: 87
  • Evalue 5.40e-15
Uncharacterized protein {ECO:0000313|EMBL:EYR82243.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 51.0
  • Bit_score: 101
  • Evalue 5.00e-19
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 51.0
  • Bit_score: 86
  • Evalue 3.80e-15

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 156
CAGGTCCGCATCATCGACGAGAACCGCCTGTCGCTGCGCATGACGGACGAGACAGTGCTGAAGGGCATCAACTCGCTGCCGCTCTTTGCCGGTTTTGCCGGCGTCGGCCTGCTGCTGCTCGCCTTCTCGGCCATGTGGTATCGCGAAGGGCGTTGA
PROTEIN sequence
Length: 52
QVRIIDENRLSLRMTDETVLKGINSLPLFAGFAGVGLLLLAFSAMWYREGR*