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SCNpilot_expt_1000_bf_scaffold_29987_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(3..842)

Top 3 Functional Annotations

Value Algorithm Source
FAD dependent oxidoreductase (Fragment) n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F526_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 281.0
  • Bit_score: 333
  • Evalue 1.80e-88
Phytoene dehydrogenase {ECO:0000313|EMBL:EYR81714.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 280.0
  • Bit_score: 527
  • Evalue 1.50e-146
phytoene dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 284.0
  • Bit_score: 301
  • Evalue 3.10e-79

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGACGTCATTTGATGCCATCGTGATCGGCGCCGGCCACAACGGCCTTGCCGCCGCCGCCCGCCTCGCCAAGGGCGGCCGCAGGGTTTTGGTGCTGGAAGCGGCGAACGAACCGGGCGGCGCGACGCGCGGCCGCGAGTTTTTCCCGGGCTTCCGCTCCGCCGGCCTTGCCCATCTCGTCAACCGGCTCGATGCGGACATGGCCCGCGACATCGGCCTCGACCTTGCCGGCACGGACAGCTTGCTGCCGACGGCGGTTCTCGACGGCTCGGGAAAGGCCGCCGTGCTGCACGGCGCCTATGGCGAGCGCATCGACGGCGTGTCGCCGCAGGAGGCGGAAGCCTTCGCGGCGCTGCGCGCGAAGCTGGTCTTCCAGGCGGGCATCCTGAAGCGGTTCCTCCGCCGCCCGCCGCCGCAGATCGGCGCGCTCTCGCTCGGCGACCTCTCCACCTTCGCTTCCGCCGGCTTCGGCCTCATCCGCAAGGGGCGCAGCGAGGGCCGCGATTTCCTGCGCATGCTGCTGATGAACGTCGCCGACGTCGCGGACGAATATCTTGCGGACGACCGGCTGAAGGGGCTCCTTGCCTTCGATGCGACGCTCGGCATCCATCTCGGCCCCCGCTCGCCGCCCTCCCTGCTCGGCCTCTACTATCGCCTGACCGGTGAGGTCGCCGGTAAGGCGGGCGGGCAATTCGTGCCGGCGGGCGGCATGGCGCGCGTCGCGCCCGCCTTCCTGCGCGCTGCCGAAAAGGCCGGCGTCACCCTGCGCTGCGGCGCGCCCGTCGGCCGCATCCTTGCCGATCGCGGCCGGGCGAGCGGCGTCGTTCTCGCCGACGGGACG
PROTEIN sequence
Length: 280
MTSFDAIVIGAGHNGLAAAARLAKGGRRVLVLEAANEPGGATRGREFFPGFRSAGLAHLVNRLDADMARDIGLDLAGTDSLLPTAVLDGSGKAAVLHGAYGERIDGVSPQEAEAFAALRAKLVFQAGILKRFLRRPPPQIGALSLGDLSTFASAGFGLIRKGRSEGRDFLRMLLMNVADVADEYLADDRLKGLLAFDATLGIHLGPRSPPSLLGLYYRLTGEVAGKAGGQFVPAGGMARVAPAFLRAAEKAGVTLRCGAPVGRILADRGRASGVVLADGT