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SCNpilot_expt_1000_bf_scaffold_31918_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(1..669)

Top 3 Functional Annotations

Value Algorithm Source
L-2-hydroxyglutarate oxidase LhgO {ECO:0000313|EMBL:EYR81086.1}; EC=1.1.3.15 {ECO:0000313|EMBL:EYR81086.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 223.0
  • Bit_score: 416
  • Evalue 2.30e-113
L-2-hydroxyglutarate oxidase LhgO n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUB1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 223.0
  • Bit_score: 416
  • Evalue 1.70e-113
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 223.0
  • Bit_score: 295
  • Evalue 1.70e-77

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
TTGACCGACATCACGATCATCGGCGGCGGCATCGTCGGCATCGCGACGGCCTACGAACTGCTGCAGCGCTTTCCCGGCATTTCGCTGGAAGTGCTGGAGAAGGAACAAAACCTTGCCCTGCACCAGACCGGGCGCAACAGCGGCGTCATCCATGCCGGCATCTATTATGCGCCGGGCAGTCTGAAGGCGGAATTCTGCCGGCGCGGCCTTGCCGCCACGCTGCGTTTTTCCGCCGAGCACGGCATCGCGCATGAACAACCGGGAAAACTGCTGGTCGCCACGTCGCCGGTCGAGATGGAGCGCCTTGCCGCGCTCGAAACGCGGGCGGCGGCGAACGGCCTCGCCGTCCGGCGCATCAGCGCCGCGGAGCTGGGGGAGATCGAGCCCAACATCGTCGGGCTCGGCGCGCTGCTGAGCCCTGCGACCGGCATCGCCGACTATGGCGCCATCGTGCGCCGCATGGCCGCGCTGGTCGGCGATCTCGGCGGGCAGGTGACCTGCGGGGCCGAGGTGCGGCACATCGAGGAGCGGGCGAACGATGTGCGCCTCACCCTCGCCGACGGAAGCGTCCGCATCACGCGCCATCTCGTCGTCTGCGCCGGCCTGATGGCCGATCGGCTCGCCGCCCTCTGCGGTCTCGGCGGCGATTTTTCCATCGTGCCCTTCAAG
PROTEIN sequence
Length: 223
LTDITIIGGGIVGIATAYELLQRFPGISLEVLEKEQNLALHQTGRNSGVIHAGIYYAPGSLKAEFCRRGLAATLRFSAEHGIAHEQPGKLLVATSPVEMERLAALETRAAANGLAVRRISAAELGEIEPNIVGLGALLSPATGIADYGAIVRRMAALVGDLGGQVTCGAEVRHIEERANDVRLTLADGSVRITRHLVVCAGLMADRLAALCGLGGDFSIVPFK