ggKbase home page

SCNpilot_expt_1000_bf_scaffold_34736_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(3..344)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJ21_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 114.0
  • Bit_score: 228
  • Evalue 4.30e-57
Putative permease {ECO:0000313|EMBL:EYR83216.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 114.0
  • Bit_score: 228
  • Evalue 6.00e-57
Permease similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 108.0
  • Bit_score: 158
  • Evalue 1.30e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
TTGCTGCATCAGGAACATCGCAGAAGTGAGCCTCGGTTTCTCGGCGCGGCGCGCCCGAGCAGCGTCGCGCTCATATCGCCCATCTCGGCGGCGCGCTGGCTCCTCGTGCTCATCGTCTTCGCCGGCATCTATTTCTTCCACGGCTTTGTAGTGCCGGTGCTCGCAGCCCTCGTCATCGCCTTTGCAAGCTGGCCGCTCTATTCGCGCCTGCTCGCCCAGGTGAACGGCAACCGCACGCTCGCCGCTTCCATCGCCATCCTCCTGATCCTCGCCTTTATCGTCGGGCCGATCATGTTCGCTGCGACTTACGCTTTCCACGAGGTTCGCGAGTGGATCGGCTGG
PROTEIN sequence
Length: 114
LLHQEHRRSEPRFLGAARPSSVALISPISAARWLLVLIVFAGIYFFHGFVVPVLAALVIAFASWPLYSRLLAQVNGNRTLAASIAILLILAFIVGPIMFAATYAFHEVREWIGW