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SCNpilot_expt_1000_bf_scaffold_39264_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(87..1187)

Top 3 Functional Annotations

Value Algorithm Source
Di-and tricarboxylate transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CNZ4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 366.0
  • Bit_score: 704
  • Evalue 5.00e-200
Di-and tricarboxylate transporter {ECO:0000313|EMBL:EYR80588.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 366.0
  • Bit_score: 704
  • Evalue 7.00e-200
transporter similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 365.0
  • Bit_score: 482
  • Evalue 1.30e-133

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
GAAGAAGGCTCTCCCTCGGTCGGCAAGTCGCTGAACGACGTGCTGAAGCACGGTGACGGTGAGGTGATCGCCACCGCCATCATCCGTGGCCATGTCCATCTCTCTCCCCTGCCAGATGTCCGTCTTGCCGCTGGCGACACGATCCTGATGGAGGGCACGGCAAGTGCGCTCGACAAGGTCGTTTCCGCCGCCGGCCTCATGCTCTCGGGCAAGCCGATCCGCGCCGGGCGCGGTGAGGAAGGGGAGATCAGCGCCATCGAGGCCGTGGTCGGCAACGATTCCCGGCTCATCGATATTTCGGCCCGCAGCATCGCGCTGTTTCATTCCTACGGCATCAACCTGCTTGCCGTCAGCCGCCAGGGCGCGCGATTGCGGGAAAAGCTCTCCGAGGTGCGGTTGCGCCCCGGCGACATGGTCGTGCTGCAGGGCAACAATCGCACCCTGCCGACGCTTTTGCCGGAACTCGGCCTGCTCCCCCTCGCCCAGCGCGAGATTTTGCTCGGCGCACCCCGCCGGGCAATCATACCCGTCTTGATCCTGATCGCCGCCATGGCCTCCACAGCGCTCGGATTCGTGCCGGTTGCGACCGGTTTCTTCGCCGCCGCCGTTGCCATGGTGCTCTTCCGCGCCGTGCCGCTGCGCGAAGCCTATGCCGCGCTCGACGGGCCGATCCTCATCATGCTCGCCTGCCTCATTCCGGTGTCCGACAGCCTGCGTACGACAGGCGCCAGCGAACTCATCGCCGGCTGGTTGGGCGACGTCGCCGTGCACCTGCCACCCTTCGGCGCGCTCGCCCTCATCCTGCTCACCGCCATGGCGATCACCCCCTTCCTCAACAATGCCGCAACCGTGCTCGTGATGGCGCCAATCGCGGCAAGTTTCGCAGGTGCGCTTGGCTACCGGCCCGAGGCCTTCCTGATGGCGGTCGCAATCGGCGCGGGCTGTGATTTCCTCACCCCTGTGGGACACCAGTGCAACACATTGGTGATGGGCCCGGGCGGCTACAAGTTCGCCGACTATCCTCGGGTCGGCCTGCCCCTGTCCTTCCTCATCGTACTCGTCAGCGTGCCCGCGCTGCTCTACGTCTGGCCGGTGCAATAG
PROTEIN sequence
Length: 367
EEGSPSVGKSLNDVLKHGDGEVIATAIIRGHVHLSPLPDVRLAAGDTILMEGTASALDKVVSAAGLMLSGKPIRAGRGEEGEISAIEAVVGNDSRLIDISARSIALFHSYGINLLAVSRQGARLREKLSEVRLRPGDMVVLQGNNRTLPTLLPELGLLPLAQREILLGAPRRAIIPVLILIAAMASTALGFVPVATGFFAAAVAMVLFRAVPLREAYAALDGPILIMLACLIPVSDSLRTTGASELIAGWLGDVAVHLPPFGALALILLTAMAITPFLNNAATVLVMAPIAASFAGALGYRPEAFLMAVAIGAGCDFLTPVGHQCNTLVMGPGGYKFADYPRVGLPLSFLIVLVSVPALLYVWPVQ*