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SCNpilot_expt_1000_bf_scaffold_46856_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 622..1404

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003694C4E similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 222.0
  • Bit_score: 124
  • Evalue 2.00e-25
ABC-type bacteriocin/lantibiotic exporter {ECO:0000313|EMBL:EYR80225.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 243.0
  • Bit_score: 480
  • Evalue 1.20e-132
ABC-type transporter, ATPase subunit similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 199.0
  • Bit_score: 110
  • Evalue 7.10e-22

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGCGCGGGAAGCTTCCAATTCGCCGCTACGCTCGTCGGCCAAAAGAGTCAAGCATGGCATTCAACCAAATCTGGCGGCATCTGGGGCCGTCCTACAAGCGTTTCACACGGATGAGCGGTGATGGTTTCGTCGCGACACCGCAGCGCCTACAAGGTATGGCAGCGGAATGTGGTGCCGTAGCACTTGCCATGCTCATGGCGCACTACGGCCGGGACATCCCACTCGATATTCTTCGGCGCCGAATCTGCTCCCCGCTGGCGGGGTCGACGTTGCGGAACCTCCGCGATGCGGCACGAGAGGAAGGCTTCTCAGCGACAGCCCGGCGGATCGACCTCGACGGCTTGGTCAATGTACCGCTCCCCGCAATCGTACATCTGCGCTTCCTTCATTTCGCAGTGCTCGAGGCTGTGTCTAAGGTCGGCGTTCGCCTTAACGATCCCGCTGAAGGGGTAGTTGAGTTGGATATGCTTGAATTTTCGCGCCAGTTCACCGGCATCGTCCTCACCATCGCATCAAATGAGCCGCGCGAAGCCGAGCGGACACACCTGATCCAATGGGACAATACGCGCGGCGGACCTGTCTGTCTTCCTGCAACGCTCCTTGCGGTTGGCGCACTCGCAGCCCCGCTAGCCCTCACCACAGGACAGGTCGGCTTGACGTTCGTCTCCGTCCTGTTTTTGCTTGCCGGGGACGGCTTAGCCATGCAGCGAACCCGCGTTGCTGCTCGCAGCAGGGCCGAGCGACATGCTGCAAGTCTCGAGGAACATGTGAAGCGCTGGCCT
PROTEIN sequence
Length: 261
MRGKLPIRRYARRPKESSMAFNQIWRHLGPSYKRFTRMSGDGFVATPQRLQGMAAECGAVALAMLMAHYGRDIPLDILRRRICSPLAGSTLRNLRDAAREEGFSATARRIDLDGLVNVPLPAIVHLRFLHFAVLEAVSKVGVRLNDPAEGVVELDMLEFSRQFTGIVLTIASNEPREAERTHLIQWDNTRGGPVCLPATLLAVGALAAPLALTTGQVGLTFVSVLFLLAGDGLAMQRTRVAARSRAERHAASLEEHVKRWP