ggKbase home page

SCNpilot_expt_1000_bf_scaffold_45334_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 2..1471

Top 3 Functional Annotations

Value Algorithm Source
Zeta toxin n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHK9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 501.0
  • Bit_score: 683
  • Evalue 1.20e-193
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR77658.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 501.0
  • Bit_score: 683
  • Evalue 1.70e-193
zeta toxin similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 503.0
  • Bit_score: 657
  • Evalue 3.80e-186
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
CACCTGCTCGCCCAGCGTCGCGATGCTGACGGCGACAATGGGCAAAAGCGGGGGCGATCGATCTTTCAGAACCGCGCCGACGCACTCGGTTTGTTCGTAGAGTTGTATGACAGTGCGCTGCGGGATGCGGAGCGTCGGCCGATTGGCAACATCGAAGCCCATGCGGTCGGTCGGCTATCGCAGAGCTACATGGCGCTGAAACTGGTTGAAGCCGCCCGAGACCTCGGCCTCTTGCCTGATAACGCGACCATCGTATCCACGCGGGCAATGGTCCAGGATAAGCATAGCACCCGCCAGTTCCCGGCGGGGCATCGATTGCCAGCGGATCTCGCGGTTGAAACGCCGGATGGATCGCGCCGCCGGCTGACGGAAAGTTTTGATGTCGCGCTGAACCAGACCGCCATTGATCGCGACATCTTTGGGCGAACCGATCGTCTGTCGCGGCNNNNNNNNNNNNNNNNNCTCGCTCGCGCCGCCAACGCTGTCGCTTCCGGCAGCATGTCGGCGGACGCTGCCATGTCTGATGTCGTCGAGCCGGGATATGCGGCGGCAATTGCTCAGGCGCGCGGGCGCCTTGAGCGGAACATGGCCATTGCGGAGCGTACCGCGATGGCCACCATGGTCGTGGACGAAAGGGGAGAGCCGGTCCGTGCGCTGCGGGACGAGCTTCGGCTACGAACAACCGACCTTGAAAACCGGGCACGAGCCAAAACCATGATGGAGGCTATCATTGCTGAAACGGCGCGGCATGATCGCCTCGACGCCGAAGGACGCCGCGCAGCCGGCGATCTTGTTCGTGGTATTGCCGACAACGAGCGTAGCCTTGGAGCTGGCCGCTCGTGGGAACGCGGGACAGCTCGATCTGATGCCCTGGTTCCGGCGCGGGATCTGCCCGATCTGTCCGAGAGCGAGATCGCGGATCGGCTGCGTGCGTCTTCGCGCCTTGCCGATAAGCGGGCCGAGATCGACAATCTGTCCTGTCTGGTGTTCGACAACAGCCAGGCGGTCTCGTCCTCGGTTGAGCGGATCACCGGTGCGCAGAGCGGAGCGGCCGCCGGCGACGACGTGCGCGAGGGCCGCCTTGGTGAAATGGCCGGTGACGGGCGGACATGGCTAAAGGGACCGAGCGCGGCACGCCAGACAGCGGAGGCCCACGCTCCGCACCTTGCGGCGGCGTTGGCCGATTATGGGATGGCCGTCGATTTCGAGCGGCATCAGATCAATCTTCACCACCGTGAGGAGCAGGCGCGGTACCGGGCGGAAGTTCCCAGGCCATCGAAGGAACTTTCCGCCTTGATGTCCGGCACTGACCAGGACCAGGTACGTCGCTTGAATGCCGATCCATCCCTCCGTCGTGAGCTTGAGGAGATTACGCTGGCGATAGCCAAACGTCTTTCCTCGGCGGATCGCGCTGACCTGAAAGGCGGAAATGTAACGAGGCTAGGGTCTTCCCTTGGGATAACGCCGGAG
PROTEIN sequence
Length: 490
HLLAQRRDADGDNGQKRGRSIFQNRADALGLFVELYDSALRDAERRPIGNIEAHAVGRLSQSYMALKLVEAARDLGLLPDNATIVSTRAMVQDKHSTRQFPAGHRLPADLAVETPDGSRRRLTESFDVALNQTAIDRDIFGRTDRLSRXXXXXXLARAANAVASGSMSADAAMSDVVEPGYAAAIAQARGRLERNMAIAERTAMATMVVDERGEPVRALRDELRLRTTDLENRARAKTMMEAIIAETARHDRLDAEGRRAAGDLVRGIADNERSLGAGRSWERGTARSDALVPARDLPDLSESEIADRLRASSRLADKRAEIDNLSCLVFDNSQAVSSSVERITGAQSGAAAGDDVREGRLGEMAGDGRTWLKGPSAARQTAEAHAPHLAAALADYGMAVDFERHQINLHHREEQARYRAEVPRPSKELSALMSGTDQDQVRRLNADPSLRRELEEITLAIAKRLSSADRADLKGGNVTRLGSSLGITPE