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SCNpilot_expt_1000_bf_scaffold_52573_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(403..1299)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:EYR84161.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EYR84161.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 266.0
  • Bit_score: 515
  • Evalue 6.40e-143
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 310.0
  • Bit_score: 470
  • Evalue 4.10e-130
DNA polymerase III subunit gamma/tau n=1 Tax=Rhizobium giardinii RepID=UPI000367105E similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 308.0
  • Bit_score: 473
  • Evalue 1.20e-130

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
CATGTCGACGTCATCGAGATGGACGCCGCCTCCCACACCGGCATCGACGATATCAGAGAGATCATCGAGCAGGTGCGCTATCGCCCGGTTTCGGCGCGTTATAAAGTCTACATCATCGACGAAGTGCACATGCTCTCGACGCAGGCCTTCAACGGCCTGTTGAAGACGCTCGAGGAGCCGCCGGAGCACGTCAAGTTCATCTTCGCCACGACGGAGATCCGCAAGGTCCCAATCACCGTCCTGTCGCGCTGCCAGCGTTTCGACCTGCGCCGGATCGGCGCCTCCGATCTCGTCGGCCTCTTCACCACCATCCTGGGCAAGGAAGGCGTGGAATTCGAGCCGGATGCGCTCGCCATGATCGCCCGCGCCGCCGAAGGCTCGGCCCGTGACGGCCTGTCGCTGCTCGACCAGGCGATCGCCCATGGCGGCGGTCGCGTCGAGGTGAATGCCGTGCGCGGCATGCTCGGTCTTGCCGACCGCGCGCGCATCGTCGACCTCTTCGAACATGTCGTGAAGGGCGATGCCGCAGCCGCGCTCGCCGAATTTTCCGCGCAATACGAGGCCGGTGCCAGCCCGCCCGTGGTGCTGACGGACCTGGCCGATTTCACCCATCTCGTCACCCGCATGAAATATGTGCCCGATGCTGCCGGCGACCAGTCGCTGAGCGAGGTCGAGCGCGTGCGCGGCGTCGAGTTCGCCAATTCCATCGCGGTCACCGCGCTGTCGCGCATGTGGCAGATGCTCCTGAAGGGCATTCCGGAGACGGAAGCCTCCAGTCGTCCGGCGGGCGCCGCCGAGCATCACCCGCCTCGCCCCCGCCGCCAACCTGCCTTCGCCGGAAGAGGCGGCCCGCCGCCTCGCGGAGCTGTCGGGCGGCGAGGGTGGTGGCAATGGTAG
PROTEIN sequence
Length: 299
HVDVIEMDAASHTGIDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIRKVPITVLSRCQRFDLRRIGASDLVGLFTTILGKEGVEFEPDALAMIARAAEGSARDGLSLLDQAIAHGGGRVEVNAVRGMLGLADRARIVDLFEHVVKGDAAAALAEFSAQYEAGASPPVVLTDLADFTHLVTRMKYVPDAAGDQSLSEVERVRGVEFANSIAVTALSRMWQMLLKGIPETEASSRPAGAAEHHPPRPRRQPAFAGRGGPPPRGAVGRRGWWQW*