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SCNpilot_expt_1000_bf_scaffold_48671_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(711..1571)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPR0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 237.0
  • Bit_score: 434
  • Evalue 7.60e-119
Membrane protein {ECO:0000313|EMBL:EYR80907.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 237.0
  • Bit_score: 434
  • Evalue 1.10e-118
membrane protein similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 232.0
  • Bit_score: 225
  • Evalue 2.90e-56

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGCTGCTCTTTGCGGTGCTGATCGCCGGCTCCTTCTCCTTCGGGGGCCTTGCGGCGCGCTACATGGAGGCCGAGCCGCTGATGCTCTGGCGCTACATCCTGACCGTCGTCGTCATGGCGGCGCTCGCCTTCGGCGCCTTCAGGGTTCCGCTGACGCTGCCGAAGCAGGCCTGGCGCTTCCTGCTGCTCGGCGGGCTGATCGCCATCTACATGCTCACCATGTTCATGGCGCTGGAGTTCACCAGCCCCGTCGCCACCGGCGCGGTTTTCACGCTGATGCCGCTCCTGAGTGCCGGCTTCGCTTTGCCGGTGCTCGGCCAGAGGACGCGGCCCGGCGTACTCGCCGGTCTCCTCATCGCCGCGGCCGGCGCCGTGTGGGTGATTTTCCGGGGCAATATCGATGCCATCCTCGCCTTCGATGTCGGCACCGGCGAGATGATCTTCTTCGTCGGCGTCGTCTGCCATGCGCTCTACGTGCCACTGATCCGCCGCTTCGACCGGGGCGAATCGGCCGTCGGCTTCGGCTTCTGGGTAACGGTGGGCGCAACGCTCTGGTTGATCCCGCCAGGTATCCGAAGCTTGATCGCAACGGATTTCTCCGCCCTGCCCGTCGCTGTCTACGCTACCGTCACCTATCTGGCCGTCGTCACCACGGCCGGTGCGCCTGCCGGCCTCCAAGCTACTGGGCTACGGCTATCTGACGCCGAGCTTCATCATCCTGCTCGAAGGCATTCTGGGTCACGGCTGGGCGAGCCTGCCAGTCCTGGCCGGCGCCCTCGTCACCGCCTGCGGCCTGGCGCTGATGGCGCTTCTGCCGGACTGATCCGGCTCGGAAAAGGCGTCAGACCGGCTCTTCGCTGA
PROTEIN sequence
Length: 287
MLLFAVLIAGSFSFGGLAARYMEAEPLMLWRYILTVVVMAALAFGAFRVPLTLPKQAWRFLLLGGLIAIYMLTMFMALEFTSPVATGAVFTLMPLLSAGFALPVLGQRTRPGVLAGLLIAAAGAVWVIFRGNIDAILAFDVGTGEMIFFVGVVCHALYVPLIRRFDRGESAVGFGFWVTVGATLWLIPPGIRSLIATDFSALPVAVYATVTYLAVVTTAGAPAGLQATGLRLSDAELHHPARRHSGSRLGEPASPGRRPRHRLRPGADGASAGLIRLGKGVRPALR*