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SCNpilot_expt_1000_bf_scaffold_66190_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 575..1039

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 155.0
  • Bit_score: 305
  • Evalue 4.00e-80
Virulence sensor histidine kinase PhoQ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQH8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 155.0
  • Bit_score: 305
  • Evalue 2.90e-80
histidine kinase similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 151.0
  • Bit_score: 111
  • Evalue 3.20e-22

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGCGCAGCCATGTGGAACGCGAACTGGCCCTTGCCCGCATCGCTGCCAGCGCGGACCTGCGCCGCTCAGATACCGACGTGGCCAAGATCGTCGGCGAACTCGTGCGCATCCTCAAACGCTCGCGCTCCGGTGAGCGCTTGAGGTTTGAGATCGACGGCCGGAGCACCGAAATCGCACCCATGGATCCTGCCGACTTTCGCGAACTCATCGGCAACCTCCTCGAAAATGCCGTCAAATGGGCGAAATCGGAGATCCACATCCGCTGGTGGCGCAATGAAGCCGGCCTGCATCTGGCGATCTCGGATGACGGTCCCGGCGTGCCGGAGCAGGAACTCGGCTATCTCACCCGCCGCGGTTGGCGTCTCGACACGGCATCACCCGGCTCCGGCCTCGGTCTCTCGATCGTCCGGGAGATCGTCGATGTCTATCGCATCGGCTTTGCGCTGCGGAACCGGAAAGCCGAT
PROTEIN sequence
Length: 155
MRSHVERELALARIAASADLRRSDTDVAKIVGELVRILKRSRSGERLRFEIDGRSTEIAPMDPADFRELIGNLLENAVKWAKSEIHIRWWRNEAGLHLAISDDGPGVPEQELGYLTRRGWRLDTASPGSGLGLSIVREIVDVYRIGFALRNRKAD