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SCNpilot_expt_1000_bf_scaffold_60937_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 550..924

Top 3 Functional Annotations

Value Algorithm Source
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 124.0
  • Bit_score: 214
  • Evalue 2.20e-53
3-deoxy-D-manno-octulosonic acid transferase WaaA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIJ9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 124.0
  • Bit_score: 247
  • Evalue 7.40e-63
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EYR79509.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 124.0
  • Bit_score: 247
  • Evalue 1.00e-62

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGGGCTCTATCTGCGTATGACGGAGATCGCCTTCGTCGGCCGCTCGCTGTTTGCCGAAGGCGGGCAGAACCCGCTGGAGCCGGCCATGCTCGGCTGCGCGATCCTGTCGGGCGGCAATGTGCAGAATTTCCGCGAGGCCTATCAGCAGCTCGCCCGCAACGGCAGCGCCAAGATGGTGCGCGACACGGAGATGCTGGCCAAGGGCGTGCACTACCTGCTCGTCAACGACGAGATGCGCAAGCAGATGATCGAGGCGGGGCAGGAAACCGTGCAGGAGATGCGCGGTGCGCTGCGCGCCACCATCAAGGGGCTGGAGCCCTACATCAACCCGCTCACTGTGAAGGCACGGTTGCATCCGCGCCAGACGTCCTGA
PROTEIN sequence
Length: 125
MGLYLRMTEIAFVGRSLFAEGGQNPLEPAMLGCAILSGGNVQNFREAYQQLARNGSAKMVRDTEMLAKGVHYLLVNDEMRKQMIEAGQETVQEMRGALRATIKGLEPYINPLTVKARLHPRQTS*